| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009273 | 2,420,353 | A→T | intergenic (‑86/+135) | hisJ ← / ← argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,420,353 | 0 | A | T | 98.0% | 483.3 / ‑5.9 | 154 | intergenic (‑86/+135) | hisJ/argT | histidine/lysine/arginine/ornithine transporter subunit/lysine/arginine/ornithine transporter subunit |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base T (84/66); total (85/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 160 total aligned reads displayed.
ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT > CP009273/2420207‑2420498 | gttccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAatat < 1:1320088/146‑1 (MQ=255)aCGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAatat < 1:2645212/149‑1 (MQ=255) gccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGGCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAatatat < 2:1199913/149‑1 (MQ=255) ccgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATc < 1:412168/149‑1 (MQ=255) cgcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGAAATATATcc > 1:708094/1‑149 (MQ=255) gcAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATATCCTCAACTGACAGTCTTTTTATAGGGAATATTTAGAGGTTTGTTACACTTATCGTGCCGTAAAATTGACCATCAAGGCAATATATccc > 1:1968587/1‑149 (MQ=255) ttGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGccc > 2:2307157/1‑149 (MQ=255) gcTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGtt > 2:1232954/1‑149 (MQ=255) cTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCCACCGACGCCCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTa < 2:2620313/149‑1 (MQ=255) cTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGGCAGTCTTGTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTa > 2:1552076/1‑149 (MQ=255) cTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCAGCAAGGCAATATATCCCGCCCCGTTa > 2:196175/1‑149 (MQ=255) tGGAGAAGGGCAGAACCCGAGAGCGCGATAGCCCCAGTTTTTTCATAATGTCCTCATCCGACAGGCTTTTTATAGTGAATATTTACAGGTTTGCTACCCTCTTCGTGCCATAAAATTGACCCTCAAGGCAATATAGCCCGCCCCGTTAg < 1:1760850/149‑1 (MQ=255) ggCCAGAACCAGAGAGAGAGATAGCACCAGTTTTTTCATAATGTCCTCAACCGACAGTGTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAACAACCCGCCCCGTTAGACGtatt < 2:393783/149‑1 (MQ=255) gCCAGAACCAGAGAGAGCGATGGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGtatta > 2:1890205/1‑149 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTCGACGtattat > 1:2075533/1‑149 (MQ=255) ccAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGtattat > 2:2297002/1‑149 (MQ=255) cAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATCAAATTGACCATCAAGGCAATTTATCCCGCCCCGTTAGACGTataatt > 2:1814545/1‑149 (MQ=255) aGAACCAGGGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTAttt < 1:486536/149‑1 (MQ=255) aGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTAttt > 2:1608757/1‑149 (MQ=255) gAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTAtttt < 1:728977/149‑1 (MQ=255) aCCAGACAGAACGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCAGAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTc < 1:216062/149‑1 (MQ=255) ccAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCa < 1:781219/149‑1 (MQ=255) cAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCAt > 1:2519643/1‑149 (MQ=255) agagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTGTTATAGGGTATATTTACAGGTTTGTTACACTTCACGTGCCATAAAATTGTCCATCAAGGCAATATAGCTCTCCCCGTTAGACGTATTATTTTTCATTaa < 1:1849148/149‑1 (MQ=255) gagagCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTaaa < 1:1784727/149‑1 (MQ=255) tgtaTAGCACTAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTTCAGGTTTGTTACATTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATg < 2:1952647/146‑1 (MQ=255) gCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCCATATATCCCGCCCCCTTAGCCGTATTATTTTTCATTaaaaaag > 1:2505826/1‑147 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGAATTATTTTTCCGTAAAAATGc > 1:2405600/1‑149 (MQ=255) cGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAAGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCACGTTAGACGTATTATTTTTCATTAAAAAtac > 2:1788500/1‑147 (MQ=255) aTAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCtt < 1:2383481/149‑1 (MQ=255) aGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTaa < 2:992951/149‑1 (MQ=255) cagcAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATATATTTGACCATCAAGGGAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGt < 2:94395/146‑1 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCGTTAAGATTGACTATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCGTAAGTa > 1:1618448/1‑149 (MQ=255) aCCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTa > 1:1808049/1‑149 (MQ=255) cAGTTTTTTAATAATGTCCTCAACTGACAGTCTTGTTATAGGGTATATTTACAGGGTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTCGACGTATTATTTTTCATTAAAAATGCGTAAGTATg > 1:907796/1‑149 (MQ=255) ttcaatatatCCTTAACTGACAGTCTATCCATAGGAAATATTTACAGGTTTGTTACACTTATCGTGCAATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCa < 1:1802453/140‑1 (MQ=255) ttCTTATTGGCCTTATCTGACAGTCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCa < 2:970606/149‑1 (MQ=255) cATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAAt < 2:583558/149‑1 (MQ=255) cATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAAt > 1:2300298/1‑149 (MQ=255) aTAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATg > 2:407576/1‑149 (MQ=255) tAATGTCCTCAACTGACAGTCTTTTTATAGGGAAGATGTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGc > 2:1190650/1‑149 (MQ=255) aTGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcac < 2:1659498/149‑1 (MQ=255) gTCCTCAACTGACAGCCTTTTTATAGGGAATATTGACAGGCTCGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcacca < 1:742965/149‑1 (MQ=255) tCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGcaccac > 1:1815643/1‑149 (MQ=255) ccTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTGAAATGcatactt < 1:651769/149‑6 (MQ=255) cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCCCCACGa > 2:940036/1‑149 (MQ=255) cTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTGTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCACCGCACCGCTTATTTTTCTCTAAAAATGCTTCAGTATGCCCTCCCATGCACCCCGa > 2:1822300/1‑149 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATTTTTACTGGTTTGTTACACTTATCGTTCCATAAAATTGACCATCAAGGCAAGATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGAt < 2:970394/149‑1 (MQ=255) tCAACTGACAGTCTTTTTATAGGGAATATTTACAGGCTTGTTACACTTATCGTGCCATAACATTGACCATCAAGGCAATATATCCCGACCCGGTAGACGTATTATTTTTCATTAAAAATACGTACGTATGCCTTTCACTGCACCACGAt > 1:2053540/1‑149 (MQ=255) acatgtcAGTTTTTTTATAGGGAATAGTTACAGGTTTGTTACCCTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAg < 1:1311694/143‑1 (MQ=255) tCTTTTTATAGGGAATATTTACAGTTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa < 1:1739863/149‑1 (MQ=255) tCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACaaa > 1:858276/1‑149 (MQ=255) tttttATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGAAACAAAcc > 1:519802/1‑149 (MQ=255) tagaGGGAATATTTAGCGGTGTGTTACACTTATCGGGCCGTAAAATTGACCAGCGAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTGTGCACTTCAATGCACCACGATGGTGCAACAAACCTGGc < 1:1236274/146‑1 (MQ=255) ataGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCg > 2:7004/1‑149 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGc > 2:2076898/1‑149 (MQ=255) gggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGc > 2:1647320/1‑149 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGCCGTGcc > 2:2373572/1‑148 (MQ=255) ggAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGAAAGTGCAACAAACCTGGCGTGCa > 1:1520177/1‑149 (MQ=255) atatTTACGGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCa < 2:2035234/149‑1 (MQ=255) atatTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAACCCTGGCGTGCACCa < 2:2650615/149‑1 (MQ=255) ttACAGGTTTGGTACACTTATCGGGCCATAAAATTGACCTTCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatgat < 1:1049003/149‑1 (MQ=255) tACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatgatg > 1:407001/1‑149 (MQ=255) tACAGGTTTGTTACACTGATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCatgatg < 1:72108/149‑1 (MQ=255) tGTTACGGTTAACGGGTCATGAAGTCGACCATCAAGGCAATATATCCCGCCCCGTTAGAAGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACCCGCCTGGCGTGCACCATGATGATCATTcc < 2:1625493/149‑1 (MQ=255) ttACACTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCAt > 2:2123038/1‑149 (MQ=255) tACACTTTTCGGGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGTCGTATTATTTTTCATTAAAAATGCTTAAGTTTGCATTTCAATGCACCACGATAGTGCACCAAGCCTGGCGTGCACCATGATGATCATTCCATc < 1:797329/149‑1 (MQ=255) acacTTATCGTGCCATCAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGACGTGCACCATAAGGATCCTTCCGTCa > 2:491939/1‑149 (MQ=255) acacTTATCGTGCCATATAATTGACCATCAAGGCAATATATCCCGCCCCTTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCa < 2:2256281/149‑1 (MQ=255) cacTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg > 2:1865579/1‑149 (MQ=255) cacTTATCGGGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAg < 2:567203/149‑1 (MQ=255) acTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATCAAGCACGAAGGTTCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAgg > 2:1529303/1‑149 (MQ=255) acTTATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGATTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGGGTGCACCATGATAATCATTCCATCAgg > 1:1111956/1‑149 (MQ=255) tATCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTAc < 1:1552076/149‑1 (MQ=255) aTCGTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACa < 2:1446803/149‑1 (MQ=255) gTGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCt > 1:1738839/1‑149 (MQ=255) tGCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCGGGTACAGCtt > 2:306109/1‑149 (MQ=255) gCCATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTc < 2:513846/149‑1 (MQ=255) ccATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc > 1:2587420/1‑149 (MQ=255) ccATAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTcc < 1:971440/149‑1 (MQ=255) aTAAAATTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTTATAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCa > 1:1871680/1‑149 (MQ=255) tAAAATGGACCAGCAAGGCAATATATCCCGCCCCGTTTGACGTATTATTTTTCCTTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCATGTACAGCTTCCCAg < 1:2062496/149‑1 (MQ=255) aaaaTTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGc > 1:2238762/1‑149 (MQ=255) aaaTTGACCATCAAGGCAATATATCCCGCCCCGTTACACGTATTATTTCTCATTAAAAATGCTTCAGTATGCCTTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCCTACGGCACCGCTTCCCAGca > 1:1016439/1‑148 (MQ=255) aaTTGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGa > 2:473229/1‑149 (MQ=255) ttGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCACAccgccg > 1:2378004/1‑149 (MQ=255) tgcccATCACGGCACTATATCCCGCCCCGTTAGACGTATTATTCTTCCTTAAACATGCTTAAGTATGCATTTCAATGCACCACGATGCCGCAACAATCCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGt < 2:2221448/146‑1 (MQ=255) tGACCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGt < 1:7004/149‑1 (MQ=255) aCCATTAAGGCAATATATCCCGCCCCGTTAGACTTATTATTTTTCATTAAAAAGGCTTAAGTATGCATTTCAATTCACCACGATAGTGCAACAAACCTGTCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTAt < 1:480944/149‑1 (MQ=255) aCCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGGCGtca > 1:662626/1‑147 (MQ=255) aCCATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATGCCATCCGGTGCGGCTTCCCAGCGCCGtgt > 1:417620/1‑147 (MQ=255) ccATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATc < 2:2300298/149‑1 (MQ=255) cagcAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTTTGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATGCCATCAGGTACAGCTTCCCAGCGACGTATCa < 1:101560/146‑1 (MQ=255) cATCAAGGCAATATATCCCGCCCCGTTTGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 2:684782/149‑1 (MQ=255) cATCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCa < 2:2519643/149‑1 (MQ=255) aTCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTACATGAGGTACAGCTTCCCAGCGACGTATCAg > 2:222715/1‑149 (MQ=255) tCAAGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCCTCAGGTACAGCTTCCCACCGACGCTTCAGt > 1:2265098/1‑149 (MQ=255) aGGCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCAc > 2:2468991/1‑149 (MQ=255) gCAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCg > 2:2571880/1‑149 (MQ=255) cAATATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATCGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCCGGTACAGCTTCCCAGCGACGTATCAGTCACCGt > 2:834639/1‑149 (MQ=255) | ACGCCGCAGTTGCGCTGGAGAAGGCCAGAACCAGAGAGAGCGATAGCACCAGTTTTTTCATAATGTCCTCAACTGACAGTCTTTTTATAGGGAATATTTACAGGTTTGTTACACTTATCGTGCCATAAAATTGACCATCAAGGCAAAATATCCCGCCCCGTTAGACGTATTATTTTTCATTAAAAATGCTTAAGTATGCATTTCAATGCACCACGATAGTGCAACAAACCTGGCGTGCACCATGATGATCATTCCATCAGGTACAGCTTCCCAGCGACGTATCAGTCACCGT > CP009273/2420207‑2420498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |