New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 4511181 =58 (1.360)4 (0.100) 4/284 5.5 6.9% coding (657/1350 nt) yjhF putative transporter
?CP009273 4511198 = 52 (1.270)coding (640/1350 nt) yjhF putative transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTATCACGTTGTAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCT  >  CP009273/4511038‑4511325
                                                                                                                                               |                                                                                                                                                
aGTATCACGTTGTAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATcggcg                                                                                                                                             <  2:325473/149‑1 (MQ=255)
 gTATCTCGTTGTAAATTCAGCCTGACTCCGCGGCACTTTTGGCATTAGTCATCTGGATGATGGTGACAACCGCCATCAGGCTCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATcggcgg                                                                                                                                            <  1:591306/149‑1 (MQ=255)
  tATCACGTTGTAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCggg                                                                                                                                           >  2:685601/1‑149 (MQ=255)
       cGTTGTAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGGGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTcgcg                                                                                                                                      >  1:135437/1‑149 (MQ=255)
        gTTGTAAAATAAGCCTGAGTCCGCGGCACTTTTGGCATGAGTCATCGGGATGATGGCGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGACAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATGGGCGGGTcgacc                                                                                                                                     >  2:447121/1‑146 (MQ=255)
           gTAAAATAAGCCTGAATCCACGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCga                                                                                                                                  >  1:504725/1‑149 (MQ=255)
            tAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCgag                                                                                                                                 >  1:406618/1‑149 (MQ=255)
            tAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCAGGATCATTGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCgag                                                                                                                                 >  2:177239/1‑149 (MQ=255)
              aaaTAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCgagag                                                                                                                               <  1:11638/149‑1 (MQ=255)
               aaTAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCGGAATCGGCGGGTCGCGCCgagaga                                                                                                                              >  1:275800/1‑149 (MQ=255)
                     ccTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGCTCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGCGGatat                                                                                                                        >  1:88429/1‑149 (MQ=255)
                      cTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTGCGCATTCGCTGAGTCGGCGGGTCGCGCCGAGGGAGGCtata                                                                                                                       >  1:471760/1‑149 (MQ=255)
                           tCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTccc                                                                                                                  <  2:252684/149‑1 (MQ=255)
                           tCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTccc                                                                                                                  <  1:206135/149‑1 (MQ=255)
                              gcgGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCCGCATTGCCGTGAGGAAACTGATCCCCAAGACTGGCATTTGGATTTCGCTGACTCGGCCGGGTGCACCCTGAGAGACAATTGTCCCctc                                                                                                               >  2:478642/1‑149 (MQ=255)
                               cgGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTGTATTCCCctct                                                                                                              >  2:624957/1‑149 (MQ=255)
                                  cACTTTTGGCAGGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCtttt                                                                                                           <  2:375179/149‑1 (MQ=255)
                                       ttGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTaaa                                                                                                      <  1:69213/149‑1 (MQ=255)
                                       ttGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGCCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTaaa                                                                                                      <  1:46398/149‑1 (MQ=255)
                                                         atgatgGTGACAACCGCCATCAGGACCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATgcg                                                                                    <  1:557250/149‑1 (MQ=255)
                                                           tatgGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCt                                                                                  <  2:587710/148‑1 (MQ=255)
                                                            atgGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCCCTTTTTTAAAGGCGCCCGGAAAAAGGCGCTg                                                                                 >  2:468721/1‑149 (MQ=255)
                                                                 gACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGa                                                                            <  1:685601/149‑1 (MQ=255)
                                                                 gACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGCCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTTATTGCTTCCAGAACACTGCGCCCGCAGa                                                                            >  2:513332/1‑149 (MQ=255)
                                                                   cAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAAt                                                                          <  2:363896/149‑1 (MQ=255)
                                                                    aaCCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGGGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAAtt                                                                         >  1:253516/1‑149 (MQ=255)
                                                                    aaCCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAAtt                                                                         >  2:509004/1‑149 (MQ=255)
                                                                     aCCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATCATGCGCCGGCAGAGttt                                                                        >  2:244335/1‑149 (MQ=255)
                                                                       cGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTAt                                                                      <  1:177239/149‑1 (MQ=255)
                                                                        gCCATCAGGATCACCCGCAGCATTGCCGTAACAAAACTCATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGCGCCGCGCCAAGAAACCCTATATTCCCCCCTTTTTTAAAGGCGTCCGGAATAATGCCCTGGCAGAATTTAtt                                                                     <  2:441986/149‑1 (MQ=255)
                                                                         ccATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTc                                                                    <  2:504725/149‑1 (MQ=255)
                                                                             cAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATa                                                                <  2:436958/149‑1 (MQ=255)
                                                                               ggATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCATCCGGAATAACGCGCTGGCAGAATTTATTCAATAcc                                                              >  1:449818/1‑149 (MQ=255)
                                                                                         cagcaTTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCaaa                                                    <  1:149935/149‑1 (MQ=255)
                                                                                           gcaTTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGTTTTATTTCCTTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGa                                                  <  1:187716/149‑1 (MQ=255)
                                                                                                gCCGGGAGAAAACTGACCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATaaa                                             <  2:79924/149‑1 (MQ=255)
                                                                                                  cGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAggaacacgg                                           >  2:428675/1‑141 (MQ=255)
                                                                                                    tGAGACAACGGACCCCAGAGCCTGGCATTTCGCTTTCGCTGCATCGGCGGGTCGCGCGGCGAGAAGCTAGATTCCCCTTTGTTTTAAAGACGTCCGGAATAATGCGCTGGCAGAAGTTATTCAATACCGGGCCGCAAAGAATAAAGGtt                                         <  2:88429/149‑1 (MQ=255)
                                                                                                    tGAGAAAACTGGTCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGtt                                         <  2:471760/149‑1 (MQ=255)
                                                                                                        aaaaCTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGaa                                     >  1:266674/1‑149 (MQ=255)
                                                                                                        aaaaCTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGAGACGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTAGTCAATACCGGGCCGCCAAGCATAAAGGGTGGaa                                     >  2:115599/1‑149 (MQ=255)
                                                                                                              gATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCCGGTCGCGCCGAGAGAGGCTATATAGTTTTATGGTTCAAAGGAGTACGGAAGAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGa                               <  1:509004/149‑1 (MQ=255)
                                                                                                               aTCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCCATACCGGGCCGCAAGGGCTAAAGGGTGGAATGGCGAc                              >  2:633792/1‑149 (MQ=255)
                                                                                                               aTCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGaaggacgga                              >  1:508025/1‑142 (MQ=255)
                                                                                                                  ccAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATGTTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCGGCCAAt                           >  1:24647/1‑149 (MQ=255)
                                                                                                                  ccAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAAt                           <  1:31393/149‑1 (MQ=255)
                                                                                                                  acaaattctttcATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAAt                           <  2:660961/138‑1 (MQ=255)
                                                                                                                   cAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAACGGTCGGAATGCCCACCAtc                          >  2:680041/1‑148 (MQ=255)
                                                                                                                   cAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGCCCGCAAAGAATACAGGTTGGAATGCGGAGAATg                          >  2:357910/1‑149 (MQ=255)
                                                                                                                        ccTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGGGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATAcc                     <  2:253516/149‑1 (MQ=255)
                                                                                                                        ccTGGCATTTCGCTTTCGCCGAATCGGCGGGTCGCGCGGAGAGAGGCTATATTCCCCTCTTTTTTAACGGCGTCCGGAACAATGCGCTTGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGCCAATGATAcc                     <  2:266082/149‑1 (MQ=255)
                                                                                                                         cTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGCGAGAGGCTATATTCCCCTCTTTTTTAACGGCGTCCGGAATAATGCGCCGGCAGAATTTATTCAAAACCGGGACGAAAACAATACAGGTTGGAATGCTGACAATGATACCg                    <  2:63590/149‑1 (MQ=255)
                                                                                                                          tGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGGTACCgg                   >  1:100840/1‑148 (MQ=255)
                                                                                                                                 tcgctttcgctGTATCGGCGGGTCGCGCCGAGATAGGCTATATTCCCCTCTTTTCTGAAGGCGGCCGGAATAATGCGCTGGCAGAATTGATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAg            <  2:419894/149‑1 (MQ=255)
                                                                                                                                     tttcgctGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTCTTCAATACCGGGCCGCAAAGAATAAAGATAGGAATGGCGACAAGGATTACGAATATCAGTAcc        >  2:395984/1‑149 (MQ=255)
                                                                                                                                      gtcgcgGAAACGGCGGGTCGCCCCGAGAGAGCCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAACGCGCTGGCATAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCa       <  1:633792/148‑1 (MQ=255)
                                                                                                                                         gctGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATc    <  1:62915/149‑1 (MQ=255)
                                                                                                                                           tGAATGGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCt  <  2:462175/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                
AGTATCACGTTGTAAAATAAGCCTGAATCCGCGGCACTTTTGGCATGAGTCATCTGGATGATGGTGACAACCGCCATCAGGATCACCGGCAGCATTGCCGTGAGAAAACTGATCCCAAAGCCTGGCATTTCGCTTTCGCTGAATCGGCGGGTCGCGCCGAGAGAGGCTATATTCCCCTCTTTTTTAAAGGCGTCCGGAATAATGCGCTGGCAGAATTTATTCAATACCGGGCCGCAAAGAATAAAGGTTGGAATGCCGACAATGATACCGTATATCAGTACCAATCCT  >  CP009273/4511038‑4511325

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.