New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP009273	605768 =	42 (0.990)	3 (0.070)	3/288	6.1	6.6%	coding (2183/2241 nt)	fepA	iron‑enterobactin outer membrane transporter
	?	CP009273	605821 =	44 (1.060)					coding (2130/2241 nt)	fepA	iron‑enterobactin outer membrane transporter
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AACGACGCGCACTTTGTCAACAATCTGACGTTAGCATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCGCTGGCTGACCTT  >  CP009273/605674‑605969                                                                                                                                                    |                                                                                                                                                     aaCGACGCGCACTTTGTCAACAATCTGACGTTAGCATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCAt                                                                                                                                                     >  1:272503/1‑149 (MQ=255)                         cTGACGTTAGCATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGt                                                                                                                             <  1:259459/149‑1 (MQ=255)                            aCGTTAGCATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGa                                                                                                                          <  1:65588/149‑1 (MQ=255)                                   cATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGAtt                                                                                                                   <  1:554676/149‑1 (MQ=255)                                        gAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGACCCGGCCCCGGCTATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCa                                                                                                              <  1:200178/149‑1 (MQ=255)                                        gAAGTGGGTGTTTACGCTCATATACCACGTACGTCCAGGCGCGGTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGCTTGTCGAACAGATTGTCCa                                                                                                              >  2:118542/1‑149 (MQ=255)                                                       gCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACACGCACGCCACAAACGTTTGTCGAAAAGATTGTCCACGCCGCCGGTCGGAc                                                                                               >  2:134891/1‑149 (MQ=255)                                                        cTCATATACCCCGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCCGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACt                                                                                              <  2:188918/149‑1 (MQ=255)                                                                  acgcacgtCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTCCCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACAttcttc                                                                                    <  1:81562/149‑1 (MQ=255)                                                                   cgtacgtCCCGGCTCGTGATAGGTATACGCCCCTGCACCGGCGATATAGTTGGCGCCTGCCAAATCGCCCGTGGTCTGGGCATTCCCCGCACGCCACAAACGTTTGTCGACCACATTGTCCACGCCGCCGGTCAGACTGACATTCTTCg                                                                                   <  2:520646/149‑1 (MQ=255)                                                                    gtacgtCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGt                                                                                  <  1:648510/149‑1 (MQ=255)                                                                    gtacgcCCCGCCTCGTTAGAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGt                                                                                  <  1:186300/149‑1 (MQ=255)                                                                     tccgtCCCGGCTCGTTATAGGGATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTc                                                                                 <  1:168329/147‑1 (MQ=255)                                                                         tCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACAt                                                                             >  2:527606/1‑149 (MQ=255)                                                                           ccGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATcc                                                                           >  1:70390/1‑149 (MQ=255)                                                                             ggCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCa                                                                         >  1:227718/1‑149 (MQ=255)                                                                                  gTTAGAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTcg                                                                    <  2:690269/149‑1 (MQ=255)                                                                                         gTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACATTTATCAAACAGATTGTCCACGCCGCAGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGGGCTCAg                                                             >  1:448/1‑149 (MQ=255)                                                                                          tataCGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAgg                                                            <  1:690303/149‑1 (MQ=255)                                                                                            gaCGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGcc                                                          >  2:640086/2‑149 (MQ=255)                                                                                             aCGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCca                                                         >  1:73018/1‑149 (MQ=255)                                                                                              cGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTGCGTCACATCCCAGGTCGCGCTCAGGCcaa                                                        <  1:236495/149‑1 (MQ=255)                                                                                               gCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATACCAGGTCGCCCTCAGGCcaag                                                       >  2:448104/1‑148 (MQ=255)                                                                                                ccccGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCcaaca                                                      >  2:301903/1‑149 (MQ=255)                                                                                                ccccGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCcaaca                                                      >  1:138966/1‑149 (MQ=255)                                                                                                        ccGGCGATATAGTTGGCCACTGCCAAATCGCCCGAGAACTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTa                                              >  1:511407/1‑149 (MQ=255)                                                                                                         cGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCCACAATGCTGTaa                                             >  1:516921/1‑149 (MQ=255)                                                                                                         cGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTaa                                             >  1:85589/1‑149 (MQ=255)                                                                                                          ggCGATATAGCTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAg                                            <  1:34410/149‑1 (MQ=255)                                                                                                             gATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGCCGCGCTCAGGCCAACAACGCTGAAAGCAc                                         >  2:431936/1‑149 (MQ=255)                                                                                                              atatAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGCCCCACACTGCTGTAAGGACt                                        >  1:170703/1‑149 (MQ=255)                                                                                                               tataGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGCACtg                                       >  2:506200/1‑148 (MQ=255)                                                                                                                      ggCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCtt                                >  2:673780/1‑149 (MQ=255)                                                                                                                       gCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGATTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCttt                               <  1:484971/149‑1 (MQ=255)                                                                                                                        ccccTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGGTTATCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTCATTTcgtgg                              >  1:325718/1‑145 (MQ=255)                                                                                                                          ccTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACCACTTTCTTTggc                            >  2:249504/1‑148 (MQ=255)                                                                                                                              ccAAATCGCTCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTcc                        <  1:261816/149‑1 (MQ=255)                                                                                                                                  aTCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTc                    <  1:121077/149‑1 (MQ=255)                                                                                                                                   tCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCCCGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAGTGCTGTAAGGACTAATTTGTTTGGTTTCCGGTcc                   >  2:50608/1‑149 (MQ=255)                                                                                                                                     tcccGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACATATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCaa                 <  1:490463/148‑1 (MQ=255)                                                                                                                                     gCCCGTGGTCTGGGCCTTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGTCTAATTTCTTTGGTTTCCGGTCCaa                 <  1:414626/149‑1 (MQ=255)                                                                                                                                            gTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGACCGGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGTCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCgctgg          <  1:360328/149‑1 (MQ=255)                                                                                                                                            gTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCgctgg          <  1:527606/149‑1 (MQ=255)                                                                                                                                            gTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCAGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCgctgg          <  1:200400/149‑1 (MQ=255)                                                                                                                                                gggCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCGCTGGCTGa      >  2:434943/1‑149 (MQ=255)                                                                                                                                                    aTTACCCGCACGCCACAAACGGTTGTCGAACAGATTGAACATGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTGCCGGTCCAACCGCTGGCTGACCtt  >  2:118733/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     AACGACGCGCACTTTGTCAACAATCTGACGTTAGCATCAGAAGTGGGTGTTTACGCTCATATACCACGTACGTCCCGGCTCGTTATAGGTATACGCCCCGGCACCGGCGATATAGTTGGCCCCTGCCAAATCGCCCGTGGTCTGGGCATTACCCGCACGCCACAAACGTTTGTCGAACAGATTGTCCACGCCGCCGGTCAGACTGACATTCTTCGTCACATCCCAGGTCGCGCTCAGGCCAACAATGCTGTAAGGACTAATTTCTTTGGTTTCCGGTCCAACCGCTGGCTGACCTT  >  CP009273/605674‑605969

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.