New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 = 377069355 (1.290)3 (0.070) 3/288 6.1 5.7% intergenic (+306/‑66) yibL/lldP ribosome‑associated DUF2810 family protein/L‑lactate permease
?CP009273 = 3770732 46 (1.110)intergenic (+345/‑27) yibL/lldP ribosome‑associated DUF2810 family protein/L‑lactate permease
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CACAATTTCCCAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAA  >  CP009273/3770584‑3770872
                                                                                                                                                    |                                                                                                                                            
aacaATTTCCCAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGCCTCATTACACGa                                                                                                                                              >  2:430204/2‑149 (MQ=255)
     tttacaaaTTAAAGCTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGc                                                                                                                                         <  2:550812/143‑1 (MQ=255)
        cccAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTg                                                                                                                                      >  1:437335/1‑149 (MQ=255)
        cccAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTg                                                                                                                                      >  1:431768/1‑149 (MQ=255)
          cAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGa                                                                                                                                    <  2:10690/149‑1 (MQ=255)
                aaaCTCACATCAATGTTTCCAATACATAACAGTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAg                                                                                                                              <  2:3792/149‑1 (MQ=255)
                      acaTCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGAcc                                                                                                                        >  2:524685/1‑149 (MQ=255)
                        aTCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAAGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTg                                                                                                                      >  2:158381/1‑149 (MQ=255)
                         tCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGc                                                                                                                     >  1:282899/1‑149 (MQ=255)
                                    aaTACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGAGCTGCAATGAATctct                                                                                                          >  1:434115/1‑149 (MQ=255)
                                         aTAACATTTCGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGCGGACTCCAGGAGACCTGCAATGAATCTCTGGcaa                                                                                                     >  1:610945/1‑149 (MQ=255)
                                         aTAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCCCTGGcaa                                                                                                     >  1:610881/1‑149 (MQ=255)
                                         aTAACAGTTACTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGcaa                                                                                                     <  1:467003/149‑1 (MQ=255)
                                          tAACATTTAGTTAACCATTCAGTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACTTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGcaac                                                                                                    <  2:269035/149‑1 (MQ=255)
                                            aCATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGCTGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGcaacaa                                                                                                  >  1:385553/1‑149 (MQ=255)
                                                 tAGTTAACCATTCATTGTCATTATCTCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTa                                                                                             <  1:520352/149‑1 (MQ=255)
                                                 tAGTGAACCCGTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATGACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTa                                                                                             <  2:13354/149‑1 (MQ=255)
                                                  acttAACCATTCATTGTCATTATCCCCACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTAc                                                                                            <  2:610348/147‑1 (MQ=255)
                                                   gTTAACCATTCATTGTCATTATCCCTACAGAACACAATTGGCAGTGCCACTTTGACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACTCTATGTGCGTGGACTCCAGGACACCTGCAATGAATCTCTGGCAAAAAAACTACg                                                                                           >  2:381534/1‑149 (MQ=255)
                                                       aCCATTCATGGTCATTATCCCTACCCAACACAATCGGCAGTGCCACTTTTACACAACGTGTGACTAGGAGATGAGCAACAGCCTCATTACACGATGTGCGTGGACTCGAGAAGACCTGCAATCAATCCCTGACAACAAAACTACGATct                                                                                       >  2:549408/1‑148 (MQ=255)
                                                        ccATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATccc                                                                                      <  1:459834/149‑1 (MQ=255)
                                                          attcattGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCccgc                                                                                    <  1:429643/149‑1 (MQ=255)
                                                               ttGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAACCTCTGGCAACAAAACTACGATCCCGCCGGGa                                                                               >  2:191614/1‑149 (MQ=255)
                                                                      tATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTg                                                                        <  1:326752/149‑1 (MQ=255)
                                                                          ccTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGCTGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCtt                                                                    >  2:323773/1‑149 (MQ=255)
                                                                          ccTACACAAAACAATTGGCAGTGCCATTTTTATAGCTCGTGTGACAAGGTACAGCGCAAAAAAATCGTTACAAGTTGTGCATGGACTCTTGGAGACGTACAACCAGTCTTTGTGAACAAAACTACGATCCCGCCGGGAATCTCTGGAtt                                                                    >  2:26410/1‑149 (MQ=255)
                                                                           cTACATAACACAATCGGCAGTGCCACTTTTACACACCGTGTGACAAGGAGATGAGCAACCGCCACATTACACGATGTGCGTGGACCCCAGGAGACCGGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCttt                                                                   <  2:8439/149‑1 (MQ=255)
                                                                                 aacacaaTTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTc                                                             >  2:589908/1‑149 (MQ=255)
                                                                                    acaaTTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGa                                                          >  1:548428/1‑149 (MQ=255)
                                                                                     caaTTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGAt                                                         <  1:13195/149‑1 (MQ=255)
                                                                                        ttGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGc                                                      >  1:587760/1‑149 (MQ=255)
                                                                                             aGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGc                                                 >  1:142130/1‑149 (MQ=255)
                                                                                               tGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATGGCATCGCtt                                               >  1:479413/1‑149 (MQ=255)
                                                                                                gacACTTTTACCCAACGTGTGACAAGGGGCTGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTc                                              <  2:611545/147‑1 (MQ=255)
                                                                                                gCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCCTTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTc                                              <  1:572481/149‑1 (MQ=255)
                                                                                                         acacAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGt                                     <  2:435120/149‑1 (MQ=255)
                                                                                                               cGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGGGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTttct                               <  1:14865/149‑1 (MQ=255)
                                                                                                                gtgtGACAAGGAGATGAGCAACAGGCTCATTACACGATGTGCATGGACTCCAGGAGACCTGCAATGAATCGCTGGCAACAAACCTACGATCCCGCCGGGAATATCTTGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTttctt                              <  1:318606/149‑1 (MQ=255)
                                                                                                                gtgtGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAGACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTttctt                              <  1:420343/149‑1 (MQ=255)
                                                                                                                  gcgACAAGGAGATGAGCAACAGACCCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGCATCTCTGGCAACAAAACGACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTtcttct                            <  1:431319/147‑1 (MQ=255)
                                                                                                                     aCAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTg                         >  1:427769/1‑149 (MQ=255)
                                                                                                                        aGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTgcgc                      >  1:542892/1‑149 (MQ=255)
                                                                                                                         ggAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCt                     >  1:376469/1‑149 (MQ=255)
                                                                                                                          gagaTGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTgcgccg                    >  2:69148/1‑147 (MQ=255)
                                                                                                                           agaTGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCGGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCCTCCTGTTTTTCTTCTTTGCGCTGa                   <  2:82231/149‑1 (MQ=255)
                                                                                                                                        aCTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGAGTAAGCTCAAACt      >  1:95263/1‑149 (MQ=255)
                                                                                                                                            aTTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGaaa  <  1:401856/149‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                            
CACAATTTCCCAATTAAAACTCACATCAATGTTGCCAATACATAACATTTAGTTAACCATTCATTGTCATTATCCCTACACAACACAATTGGCAGTGCCACTTTTACACAACGTGTGACAAGGAGATGAGCAACAGACTCATTACACGATGTGCGTGGACTCCAGGAGACCTGCAATGAATCTCTGGCAACAAAACTACGATCCCGCCGGGAATATCTGGCTTTCCAGTCTGATAGCATCGCTTCCCATCCTGTTTTTCTTCTTTGCGCTGATTAAGCTCAAACTGAAA  >  CP009273/3770584‑3770872

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.