Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009273 2,985,002 G→T D126Y (GAT→TAT)  ygeG → SycD‑like chaperone family TPR‑repeat‑containing protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,985,0020GT99.0% 353.5 / NA 104D126Y (GAT→TAT) ygeGSycD‑like chaperone family TPR‑repeat‑containing protein
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base T (53/50);  minor base A (1/0);  total (54/50)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 105 total aligned reads displayed.

TAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAATTTGCTG  >  CP009273/2984856‑2985147
                                                                                                                                                  |                                                                                                                                                 
tAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTAt                                                                                                                                                 >  1:1554552/1‑149 (MQ=255)
tAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTAt                                                                                                                                                 >  1:813311/1‑149 (MQ=255)
 aaaaGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTGACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCtata                                                                                                                                                >  1:1530905/1‑149 (MQ=255)
  aaaGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATaa                                                                                                                                               >  2:356826/1‑149 (MQ=255)
            cATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACgcaatgcaa                                                                                                                                     <  1:978048/149‑1 (MQ=255)
             aTCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACgcaatgcaat                                                                                                                                    >  1:329024/1‑149 (MQ=255)
              tCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGcaatgcaatg                                                                                                                                   >  2:1588138/1‑149 (MQ=255)
               cAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGt                                                                                                                                  >  1:333323/1‑149 (MQ=255)
                 gTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGttt                                                                                                                                >  2:804069/1‑149 (MQ=255)
                    taacAGACCAAAAAGAAATATCAACAAGCATATGATCTTTACAAACTAAGTTACGATTACTTCCCGTATGGTGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTa                                                                                                                             <  2:204324/146‑1 (MQ=255)
                     gTCAGCCCAAAAAGAAATATCAACAAGCATACGACCTTTACAAACTAAGTTACAAGTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTAt                                                                                                                            <  1:934814/149‑1 (MQ=255)
                      tCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATc                                                                                                                           >  2:1903773/1‑149 (MQ=255)
                        aGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTGTGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCGATcac                                                                                                                         >  1:168030/1‑149 (MQ=255)
                         gCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATcaca                                                                                                                        <  2:816676/149‑1 (MQ=255)
                         gCCCAAAAAGAAATAATAACAAGCATATGACCTCTACAAACTAAGTTACCATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATcaca                                                                                                                        <  1:1609863/149‑1 (MQ=255)
                               aaaGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACAttatta                                                                                                                  >  2:29173/1‑149 (MQ=255)
                                     atatCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAAtt                                                                                                            <  2:1610203/149‑1 (MQ=255)
                                       atCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCCATGTTTCTATCACCTTATTAACAATtgt                                                                                                          >  2:1087700/1‑149 (MQ=255)
                                        tCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATtgtt                                                                                                         >  1:726418/1‑148 (MQ=255)
                                        tCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATtgtg                                                                                                         >  1:119289/1‑149 (MQ=255)
                                        tCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATtgtg                                                                                                         <  2:46074/149‑1 (MQ=255)
                                          aacaaGCATATGACCTTTACAAACTAAGCTACAATTACTTCCCGTATGATGACTATTCAGTTATTTAACGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAg                                                                                                       >  1:1188464/1‑149 (MQ=255)
                                           acaaGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAgg                                                                                                      >  1:1612898/1‑149 (MQ=255)
                                             aaGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGtat                                                                                                    >  2:1154363/1‑149 (MQ=255)
                                             aaGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGgat                                                                                                    <  2:1948141/149‑1 (MQ=255)
                                             aaGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGgat                                                                                                    <  1:1775511/149‑1 (MQ=255)
                                               gCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGgatga                                                                                                  >  2:643788/1‑149 (MQ=255)
                                                     gACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCGGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAgtgt                                                                                            >  1:911306/1‑149 (MQ=255)
                                                       ccTTTACTAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTa                                                                                          <  2:887205/149‑1 (MQ=255)
                                                       ccTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTa                                                                                          >  1:657390/1‑149 (MQ=255)
                                                        cTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTaa                                                                                         <  1:990639/149‑1 (MQ=255)
                                                          ttACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAaga                                                                                       >  1:442929/1‑149 (MQ=255)
                                                          ttACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAaga                                                                                       <  2:813311/149‑1 (MQ=255)
                                                          ttACAAACTAAGTTACAATTACTTCCCGTATGACGAATAAACATTTATGTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAaga                                                                                       <  1:857429/149‑1 (MQ=255)
                                                           tACAAACTCAGTTACAAGTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAagag                                                                                      <  1:1576000/149‑1 (MQ=255)
                                                            aCAATCTAAGTTACTATGACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGt                                                                                     <  2:1912045/149‑1 (MQ=255)
                                                            aCAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTTTCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGt                                                                                     >  2:505764/1‑149 (MQ=255)
                                                             cAAACGAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTa                                                                                    <  1:1685735/149‑1 (MQ=255)
                                                               aaCTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTaga                                                                                  >  1:1407141/1‑147 (MQ=255)
                                                               aaCTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTaaa                                                                                  <  2:1330752/149‑1 (MQ=255)
                                                                    aGTCACAATTACTTCGCGTAGGATGACTATTCAGTTATTCATCGTATGGGGCAATGTAAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCa                                                                             <  2:568229/149‑1 (MQ=255)
                                                                      ttACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTACGAGTAAAGCGCAgg                                                                           >  1:251976/1‑149 (MQ=255)
                                                                      ttACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAgg                                                                           >  1:1893273/1‑149 (MQ=255)
                                                                      ttACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAgg                                                                           >  1:922670/1‑149 (MQ=255)
                                                                          aaTTACTTCCCGTATGATGAATACTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCata                                                                       >  2:436201/1‑149 (MQ=255)
                                                                           aTTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCatat                                                                      <  2:7953/149‑1 (MQ=255)
                                                                              aCTTCCCGTATGATGACTATTCAGTTATTTATGGTATGGGTCAATGTCAGATTGGGGCTAAAAATATATATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGCTGATAGTGTTAAAAGTAAACCGCAGGCATATAtt                                                                   >  2:17678/1‑149 (MQ=255)
                                                                              aCTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATAtt                                                                   <  2:79175/149‑1 (MQ=255)
                                                                               cTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGCTGATAGTGTTAAGAGTAAAGCGCAGGCATATATTg                                                                  <  2:1188464/149‑1 (MQ=255)
                                                                               cTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTg                                                                  <  2:434378/149‑1 (MQ=255)
                                                                               cTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTg                                                                  <  1:432928/149‑1 (MQ=255)
                                                                               cTTACCGGATGATGACTATTCAGTTATTTATCGTATGGGTAAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTg                                                                  <  1:742175/149‑1 (MQ=255)
                                                                                 tCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAGGCGCCGGAATATCTTGaa                                                                >  1:847358/1‑149 (MQ=255)
                                                                                     gTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAActct                                                            >  1:1537651/1‑149 (MQ=255)
                                                                                      tATGATGACTATTCAGTTAATTATCTTATGGGCCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCtt                                                           <  1:302819/149‑1 (MQ=255)
                                                                                          atgaCTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAAc                                                       >  1:1635146/1‑149 (MQ=255)
                                                                                          atgaCTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAAc                                                       >  2:146529/1‑149 (MQ=255)
                                                                                           tgaCTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACg                                                      <  1:1901311/149‑1 (MQ=255)
                                                                                           tgaCTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCAATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACg                                                      >  2:117946/1‑149 (MQ=255)
                                                                                            gaCTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAATAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGa                                                     >  1:1214205/1‑149 (MQ=255)
                                                                                              cTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATa                                                   >  2:770693/1‑149 (MQ=255)
                                                                                              cTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATa                                                   >  2:770811/1‑149 (MQ=255)
                                                                                                  tCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTc                                               >  1:882557/1‑149 (MQ=255)
                                                                                                    aGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTAAACTCTTAAACGATAATTctg                                             >  2:746884/1‑147 (MQ=255)
                                                                                                     gTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCATGCATATATTGAACTCTTAAACGATAATTCaga                                            <  2:1084813/149‑1 (MQ=255)
                                                                                                     gTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCaga                                            <  1:720736/149‑1 (MQ=255)
                                                                                                     gTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGAAGTCATATATTGAACTCTTAAACGATAATTCaga                                            <  2:1887509/149‑1 (MQ=255)
                                                                                                      ttatttatTGTATGGGTCAATGTCAGATTGGGGGTAAAAATTTCTAGAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCagaa                                           <  1:1066207/149‑1 (MQ=255)
                                                                                                      ttatttatCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCagaa                                           >  1:1145487/1‑149 (MQ=255)
                                                                                                      ttatttatCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCagaa                                           >  1:1165165/1‑149 (MQ=255)
                                                                                                      ttatttatCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCagaa                                           <  1:1468773/149‑1 (MQ=255)
                                                                                                      ttatttatCGTATGGGTCAATGTCAGATCGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCagaa                                           >  1:1051608/1‑149 (MQ=255)
                                                                                                      tgatttatCGGATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAGCGCAATGCAATGTTTCTAGCACATTATTAACAATTGTGAGGGTGATAGTGTTAAGAGTAACGCGCAGGCATATATTGAACTCTTAAGCGATAATTCagaa                                           <  2:1202413/147‑1 (MQ=255)
                                                                                                            atCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCTCATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAActc                                                             <  2:605889/125‑1 (MQ=255)
                                                                                                            atCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAActc                                                             >  1:605889/1‑125 (MQ=255)
                                                                                                            atCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAActc                                                             >  1:605898/1‑125 (MQ=255)
                                                                                                            atCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAActc                                                             <  2:605898/125‑1 (MQ=255)
                                                                                                             acGTAAGGGTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATg                                    <  1:845780/148‑1 (MQ=255)
                                                                                                                   gggTCAATGTCAGGTTGGGGGTAAAAATATCTATAAACCAATGCAATGGTTCTATCACATTATTAACGATTATGAGGAGGATAGTGTTGAGTGGAGAGCGTAGGCATATATTGAACTCTTAAATGATAATTCATAGTATAATGGTTaat                              >  2:1736421/1‑148 (MQ=255)
                                                                                                                   gggTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAg                              <  1:787464/149‑1 (MQ=255)
                                                                                                                    gggcAATGGCAGATGGGGGCTAAAAATATCTATAACGACATGCATTGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCGGGCATATATTGAACTCTTAAACGATAATTCAGAAGATTATGGCTAAGc                             <  2:360833/146‑1 (MQ=255)
                                                                                                                     gTCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTCAGCa                            <  1:306685/149‑1 (MQ=255)
                                                                                                                      tCAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAACAGCTAATGCAGAAGATAATGGCTAAGCAt                           >  2:1864879/1‑149 (MQ=255)
                                                                                                                       cAATGTCAGATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCAtt                          <  2:1603249/149‑1 (MQ=255)
                                                                                                                             cAGATTTGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATc                    <  2:1155553/149‑1 (MQ=255)
                                                                                                                               gATTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCAt                  >  2:1754997/1‑149 (MQ=255)
                                                                                                                                aTTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCAtt                 <  2:1063909/149‑1 (MQ=255)
                                                                                                                                aTTGGGGCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCAtt                 <  2:1554552/149‑1 (MQ=255)
                                                                                                                                  tGGGGCTAAAAATATTTATAACGCAATGCAATGTTTCTTTCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTg               <  1:1382442/149‑1 (MQ=255)
                                                                                                                                    gggCTAAAAATATCTATAACGGAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGt             <  2:1729280/149‑1 (MQ=255)
                                                                                                                                      gCTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTa           >  2:246127/1‑149 (MQ=255)
                                                                                                                                       cTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTaa          >  2:67035/1‑149 (MQ=255)
                                                                                                                                       cTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTaa          >  2:540147/1‑149 (MQ=255)
                                                                                                                                       cTAAAAATATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTaa          >  1:776970/1‑149 (MQ=255)
                                                                                                                                          aaaaTATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAAtt       >  2:658652/1‑149 (MQ=255)
                                                                                                                                          aaaaTATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAAtt       >  2:1627215/1‑149 (MQ=255)
                                                                                                                                            aaTATCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAAGTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAATTTg     <  2:329024/149‑1 (MQ=255)
                                                                                                                                             atatCTATATCGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAAGATGATCGTGTTAAGTGCAAAGCGCGGGTATATATTGAACTTTTAAACGATAATTCAGAAGATAATGGCTGAGCTTTACAATCATTTGGTTAAATTTGc    <  1:1470115/149‑1 (MQ=255)
                                                                                                                                               atCTATAACGCAGTGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAATTTGCTg  <  2:1415111/149‑1 (MQ=255)
                                                                                                                                               atCTATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAATTTGCTg  <  1:1718126/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
TAAAAGATTTTGCATCAGTATGTCAGCCCAAAAAGAAATATCAACAAGCATATGACCTTTACAAACTAAGTTACAATTACTTCCCGTATGATGACTATTCAGTTATTTATCGTATGGGTCAATGTCAGATTGGGGCTAAAAATATCGATAACGCAATGCAATGTTTCTATCACATTATTAACAATTGTGAGGATGATAGTGTTAAGAGTAAAGCGCAGGCATATATTGAACTCTTAAACGATAATTCAGAAGATAATGGCTAAGCATTACAATCATTTGGTTAAATTTGCTG  >  CP009273/2984856‑2985147

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑