| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 2269346 | 10 (0.090) | 121 (1.080) | 81/290 | 0.3 | 92.4% | coding (595/1026 nt) | yejE | microcin C transporter YejABEF, permease subunit; ABC family |
| ? | CP009273 | 3576788 = | NA (NA) | intergenic (+10/‑55) | yrhA/insA | pseudogene, interrupted by IS1E/IS1 repressor TnpA | |||||
Only 100 of 240 total aligned reads displayed.
TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTAT > CP009273/2269200‑2269494 | gACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggt < 1:190761‑M1/149‑4 (MQ=255) tctctGTTCCAGCGTGATAAGCGTGCTGGCGGGAGCGCTACAAGGCTATTACGGCGATCCATTAGATTTCTGGGG‑CAACGCCGTTATTGAAGTATGGTCGGGGAGGCCGTCGCTGGTTTTGATTATTTTACTTTCCAGcgtcgggtgat > 1:1398382/1‑143 (MQ=255) ctctGTTCCAGCGTGAGGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGg < 2:697942‑M1/143‑2 (MQ=255) tctGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGgg > 2:1003986‑M1/1‑141 (MQ=255) ggtccAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgc < 1:612269‑M1/147‑12 (MQ=255) gTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgc < 1:269313‑M1/149‑12 (MQ=255) gTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgc < 1:948768‑M1/149‑12 (MQ=255) tCCGGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatg < 2:1103438‑M1/143‑8 (MQ=255) cAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAGGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTATTTGATTATTTTACTTTCCCGCGTCGgggtatgctgccaac > 1:525731‑M1/1‑134 (MQ=255) aGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGCCAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTGTTGATTATTTTACTTTCCAGCGTCGggggatcctg > 2:366030‑M1/1‑133 (MQ=255) aGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctg > 2:1060350‑M1/1‑133 (MQ=255) cagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtggtgg > 1:1208751‑M1/121‑149 (MQ=255) cacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCtgg > 2:80135‑M1/118‑143 (MQ=255) gCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGACCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgattta < 1:1333052‑M1/149‑27 (MQ=255) tggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTgg > 1:322258‑M1/114‑149 (MQ=255) acggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAt > 1:1002424‑M1/110‑149 (MQ=255) cggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCCGCGTCGTACAGCCTAACTTCTGGTGGCTGCTggcactt < 1:175448‑M1/41‑4 (MQ=255) gggggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGGCGGGGATGCCGGCGCTGTGTTTGATTATTTTACTTTCCAGCGTCGggtgatgcggccaacttacgcatatggagt > 2:27125‑M1/1‑113 (MQ=255) ctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCa < 2:1281983‑M1/38‑1 (MQ=255) gggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGt > 1:1365050‑M1/104‑149 (MQ=255) ggCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactggtttagtgtatg > 2:294661‑M1/1‑110 (MQ=255) gcacggaggtcgccgtcgttccctaaagcggtggagctgcatgacaaagtcagcgggcattatctgaacataaaacactatcaagaagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTc > 1:1287022‑M1/103‑149 (MQ=255) gcgcTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgt < 1:1111928‑M1/149‑41 (MQ=255) acggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCtt < 1:689386‑M1/49‑1 (MQ=255) cggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactgtcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACt > 2:1601510‑M1/100‑143 (MQ=255) aagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCtggcaattgccgtc < 2:768436‑M1/47‑7 (MQ=255) aaGGCTATTACGGCGGTAATGTCGAGCTCTGTGGACAACG‑CTTTATTGAAGTCTGGTCGGGGATGGTCAAGCTGTTGTTGACTTTTTTGCTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgag < 1:1872927‑M1/149‑48 (MQ=255) tcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGc > 1:1544077‑M1/94‑149 (MQ=255) gctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTg > 1:883226‑M1/92‑149 (MQ=255) gCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTGTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtg < 1:368925‑M1/149‑51 (MQ=255) tATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatgttgtttttga < 2:210300‑M1/143‑47 (MQ=255) gtcgttctcaaaatcggtggagctgcatgacaaagccatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGAt > 1:790839‑M1/89‑149 (MQ=255) ttACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGACGTATGGTCGGGCATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCATCGggtgatgctggcaacgtactgacgtggtgtaggatggtgtttttgggg > 2:1154989‑M1/1‑95 (MQ=255) cgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGa > 1:1237317‑M1/87‑149 (MQ=255) gttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGGGGCGGCTGGCCATTACTGTCTTGTTTGGCTGCATGAg < 1:705530‑M1/64‑1 (MQ=255) ttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGt > 1:384602‑M1/85‑149 (MQ=255) tctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGa > 2:1745563‑M1/84‑143 (MQ=255) ggcggTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgcccacttactgctttagtgtatgatggtgtttttgaggtgctccagtg > 1:1778824‑M1/1‑91 (MQ=255) gTAAAGTCGATCTCTGGGGACATCG‑CATTATTGAAGTATACTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtattatggtgtttttgaggtgctccactggctt > 1:462858‑M1/1‑87 (MQ=255) gATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct > 1:751496‑M1/1‑79 (MQ=255) ctctGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtt > 2:486286‑M1/1‑76 (MQ=255) ctGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag > 1:569675‑M1/1‑74 (MQ=255) ctGGCGACAACG‑CTTTATTGTAGTACGGTCGGGGCTGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGGCGggtgatgctgccaacttactgatgtagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcag < 1:25021‑M1/149‑76 (MQ=255) tGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttct < 2:882619‑M1/143‑71 (MQ=255) tGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcgtctgtttct > 2:397519‑M1/1‑73 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtggt < 2:221375‑M1/79‑1 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCgtggt < 2:1168332‑M1/79‑1 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgcgggc > 1:409954‑M1/65‑149 (MQ=255) gcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAATACTGTCCTGTTTGGCTGGATGAGTCGGGTCGGggtggt < 2:488835‑M1/79‑1 (MQ=255) gggACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttcttt > 2:287300‑M1/1‑71 (MQ=255) catgacaaagtcatcgggcattatctgaacataaaacactatcaatacgttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgcgggcg < 1:694189‑M1/86‑1 (MQ=255) ggACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgt < 1:647948‑M1/149‑80 (MQ=255) atgacaaagccatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgc > 2:1579545‑M1/63‑143 (MQ=255) tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGa > 1:1088715‑M1/62‑149 (MQ=255) tgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGGGCGGGCGGa < 1:318307‑M1/88‑1 (MQ=255) gacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTgcgg > 2:1460049‑M1/61‑143 (MQ=255) aaCG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccct > 1:1555860‑M1/1‑66 (MQ=255) aaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGttt < 1:1531454‑M1/92‑1 (MQ=255) cG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcc > 1:523340‑M1/1‑64 (MQ=255) agtcatcgggcagtatctgaacataaaacactctcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGa > 2:1031877‑M1/56‑143 (MQ=255) gtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTa > 1:1848631‑M1/55‑149 (MQ=255) gcatcgggcagtatctgaacataaaccactatcaattagttggagtcattaccCCAGCGTCGTACAGCCTACCTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 1:905185‑M1/54‑149 (MQ=255) cTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcc < 2:358705‑M1/143‑82 (MQ=255) tttATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtgcctcctgt > 1:824920‑M1/1‑61 (MQ=255) tATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctc < 2:1735835‑M1/143‑85 (MQ=255) ttGCAGTATTGTCGGGGATGCGGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctcccatcttactgatttagtgtatgatggtgtttttgaggtgctccagtggtttctgtttctatcagctgtccctcct < 2:645387‑M1/143‑87 (MQ=255) ttGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcct < 2:935014‑M1/143‑87 (MQ=255) ggcattatctgaacataaaacactatcaattaggtggaggcatttccCCAGCGTCGTACAGGCTAACTTCTGGTGGCTGGTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTAc > 2:59796‑M1/48‑143 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGGGTTTTTACGTACTGGTa < 1:1169201‑M1/105‑1 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACGCGTa < 1:1027270‑M1/105‑1 (MQ=255) attatctgaacataaaacactatcaataagttggagtcattaccCCAGCGTCGAACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTa < 2:1540298‑M1/99‑1 (MQ=255) ttatctgaacataaaaaactaggaatgagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTAc > 2:1230764‑M1/44‑143 (MQ=255) ctgaacctgaagcactatcaataagttggagtccttaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGt > 2:610408‑M1/40‑143 (MQ=255) gTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgg < 1:1040413‑M1/149‑103 (MQ=255) tCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctagcagctgtccctcctgttctgctactgacggg > 1:243677‑M1/1‑46 (MQ=255) gaacataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGa < 1:392438‑M1/112‑1 (MQ=255) cataaaacactatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAAttt > 2:564482‑M1/35‑143 (MQ=255) caaacactatcaataagttggcgtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAGTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTTCGGGCGGAGTTTTCACGTACAAGTAAGTTcgg > 2:1254680‑M1/32‑142 (MQ=255) ggcgcTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaa < 1:869065‑M1/147‑115 (MQ=255) gACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTg > 1:1562868/1‑149 (MQ=255) actatcaataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTg > 1:667373‑M1/27‑149 (MQ=255) gCTGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcg < 2:520044‑M1/143‑112 (MQ=255) tGTTTTTGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacgggggggtgcgtaacggca > 1:1695674‑M1/1‑30 (MQ=255) aataagttggagtcattaccCCAGCGTCGTACAGCCTAACTTACGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTg < 2:721456‑M1/123‑1 (MQ=255) ttgttgatTATTTTACGTTCCAGCGTCGggtgatgctgccaacttactggtttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaac < 2:1360580‑M1/140‑116 (MQ=255) tcagttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCg > 2:866161‑M1/19‑143 (MQ=255) tGATTATTTTCCTTTCCAGCGTCGggtgatgctgccaacttactgatttcgtgtatgatggtgtttttgaggtgctccagtggcttctgtttttatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagca < 1:733777‑M1/149‑126 (MQ=255) tGATTATTTTACTTTCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggca > 2:1411997‑M1/1‑24 (MQ=255) gttggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGGCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGca < 2:1681381‑M1/128‑1 (MQ=255) gATTATTTTACTTTCCAGCGGCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctccggtgcagctactgacggggtggggcgtagcggcca > 2:955535‑M1/1‑23 (MQ=255) tggagtcattaccCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGcaca < 2:1180665‑M1/130‑1 (MQ=255) tttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg > 2:557786‑M1/1‑12 (MQ=255) tttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg > 2:86919‑M1/1‑12 (MQ=255) tttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcatggtcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatc > 1:364069‑M1/1‑12 (MQ=255) tttCCAGCGTCGggtgatgctgccaacttactgatttagtgtatgatggggtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccg > 2:261244‑M1/1‑12 (MQ=255) aGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAAGTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCg < 1:1461589/149‑1 (MQ=255) gCGTCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaacagcaccgccggacatc > 2:253255‑M1/1‑6 (MQ=255) tCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc > 1:266113‑M1/1‑3 (MQ=255) tCGggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatc > 1:117719‑M1/1‑3 (MQ=255) gtACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGGTTTTACGTACTCGTAATTTCGACTACATTCGTGCCGCACCGGCGCTTGGCGGCAGCGCTca > 2:1340857/1‑142 (MQ=255) | TGACTCTCTGTTCCAGCGTGATGGGCGTGCTGGCGGGGGCGCTACAAGGCTATTACGGCGGTAAAGTCGATCTCTGGGGACAACG‑CTTTATTGAAGTATGGTCGGGGATGCCGACGCTGTTTTTGATTATTTTACTTTCCAGCGTCGTACAGCCTAACTTCTGGTGGCTGCTGGCAATTACTGTCTTGTTTGGCTGGATGAGTCTGGTCGGCGTGGTGCGGGCGGAGTTTTTACGTACTCGTAATTTCGACTACATTCGTGCGGCACAGGCGCTTGGCGTCAGCGATCGCAGTAT > CP009273/2269200‑2269494 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |