New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009273 1203246 =82 (1.170)7 (0.110) 7/264 7.6 9.9% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?CP009273 1205075 = 54 (0.860)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA  >  CP009273/1204938‑1205223
                                                                                                                                         |                                                                                                                                                    
agaaGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAGGttttcgagag                                                                                                                                           <  1:174230/147‑8 (MQ=255)
aTAAACCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGaaaa                                                                                                                                           <  1:1085662/149‑1 (MQ=255)
   aGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATga                                                                                                                                        <  2:1128052/149‑1 (MQ=255)
            cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTTGCGGAGTGGCTGAAGGCCACGGAACCGGTACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAAGAAAAAATAAc                                                                                                                               >  2:270818/1‑149 (MQ=255)
            cAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAAAGTTTATGAAAATGAAGAAATaga                                                                                                                               >  1:404657/1‑147 (MQ=255)
             aGTTCCGGGTATCCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACa                                                                                                                              <  1:46349/149‑1 (MQ=255)
               ctCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATCGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAg                                                                                                                            <  2:853997/148‑1 (MQ=255)
                        ttcttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGca                                                                                                                   <  2:281202/149‑1 (MQ=255)
                           ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGTAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                                                >  1:737991/1‑149 (MQ=255)
                           ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTCATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGcatca                                                                                                                >  2:10206/1‑149 (MQ=255)
                           ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAACAGCAGTAATAACAAGCAAATGgcagca                                                                                                                >  1:1088458/1‑149 (MQ=255)
                           ttcAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGaatcc                                                                                                                >  1:679843/1‑148 (MQ=255)
                                 agcaaaaGCGGCACCTTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCCGAAGGCCACGGAACCGGGACACCAACATGTAACACAGAGCCCTCCCCCAAAACAACGTTTATGAAAATGGAGCAGTAACAACCAAAGGGCAGCATACCTg                                                                                                          >  1:310222/4‑149 (MQ=255)
                                 agAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTg                                                                                                          >  2:543620/1‑149 (MQ=255)
                                  gAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCACCAGGTAATGCAGAGCCGTCGCCCAAACCAACGGTTATGAAAATGAAGAAATAACAAGCAAATGGCACCATTCCTGc                                                                                                         >  1:979613/1‑149 (MQ=255)
                                     aaaGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACATGTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCttt                                                                                                      >  2:322532/1‑149 (MQ=255)
                                         cGGCACCATTGCATTTCAGCCAGCATGTTGCCGGAGTGCCTGGCGGACCGGGACCCCCGCGATCGACTGGTAGTTGAGGGCCTGGTCGCTAAGCAATTGTTGTGAGAAGGGAGGAATAACAAGCAAATGGCATCATTCCTGCTTTTAcc                                                                                                  <  1:839895/149‑1 (MQ=255)
                                          ggCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACCAGCAAATGGCATCATTCCTGCTTTTAcac                                                                                                 >  1:239181/1‑147 (MQ=255)
                                                aTTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGa                                                                                           <  1:326469/149‑1 (MQ=255)
                                                 ttGCATTTCAGCCAGCCTGTTGGCGGCATGGCGGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGAt                                                                                          >  1:1102476/1‑149 (MQ=255)
                                                    cATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTa                                                                                       >  2:629336/1‑149 (MQ=255)
                                                      tttCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAAAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCCTTCCTGCTTTTAACAGGGGGTCTTAAc                                                                                     >  1:510136/1‑149 (MQ=255)
                                                        tCAGCCAGCCTGTCGGCGGAGTGGCTGCAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCCTTTACCCGGGGGATCTAACac                                                                                   >  1:797358/1‑148 (MQ=255)
                                                              agccTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATCCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGCAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGTGGATTTAACATGCTTAt                                                                             <  1:847000/149‑1 (MQ=255)
                                                                  tGTTGGCGGAGGGGCTGAAGGCCACGGAACCAGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCGACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGc                                                                         <  2:509220/149‑1 (MQ=255)
                                                                   gTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGTTTATTgggg                                                                        >  2:379452/1‑147 (MQ=255)
                                                                     tGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTAt                                                                      >  2:707282/1‑149 (MQ=255)
                                                                             tGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGt                                                              <  2:820030/149‑1 (MQ=255)
                                                                              ggCTGAAGGCCCCGGAACCGGGACACCAACAGGTAATGCAGCGCCTTCTCCCAAACCCACGTTTATAAAAATGCAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTGACATGCTAGTTGGCTATGTCGGCGTa                                                             >  2:472043/1‑149 (MQ=255)
                                                                               gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCCGACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTAt                                                            <  2:1069561/149‑1 (MQ=255)
                                                                               gCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACTTGCTTATTGGCTATGTAcgcgatt                                                            >  1:927061/1‑146 (MQ=255)
                                                                                cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                           <  2:1088458/149‑1 (MQ=255)
                                                                                cTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATc                                                           >  1:200038/1‑149 (MQ=255)
                                                                                 tGAAGGCCACGGAACCGGGCCACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAAAGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGGTATGTGCACGTATca                                                          >  2:161122/1‑149 (MQ=255)
                                                                                 tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATca                                                          >  2:78872/1‑149 (MQ=255)
                                                                                 tGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATca                                                          >  1:135685/1‑149 (MQ=255)
                                                                                      gCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCACCGTTTATGAAAATGAAGAAATCACAAGCAAACGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTCCGCGTATCaaaaaa                                                     >  1:212944/1‑149 (MQ=255)
                                                                                       ccACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                    >  2:384830/1‑149 (MQ=255)
                                                                                       ccACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAAt                                                    <  1:543620/149‑1 (MQ=255)
                                                                                        cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg                                                   >  1:182647/1‑149 (MQ=255)
                                                                                        cACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCATGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATg                                                   >  2:52871/1‑149 (MQ=255)
                                                                                            gAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCACATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                                               <  1:544007/149‑1 (MQ=255)
                                                                                            gAACCGGGACACCAACAGGCAAGGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCa                                               <  2:882687/149‑1 (MQ=255)
                                                                                              aCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAACTGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGa                                             >  2:159025/1‑149 (MQ=255)
                                                                                              aCCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAgc                                             >  1:963073/1‑148 (MQ=255)
                                                                                                    acacCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAg                                       <  2:391315/149‑1 (MQ=255)
                                                                                                        cAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAGTGGAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATGAACAAATGACCAGAACACAGAtat                                   >  2:282747/1‑147 (MQ=255)
                                                                                                         aaCAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTa                                  >  2:929856/1‑149 (MQ=255)
                                                                                                            aGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACaa                               <  1:1040185/149‑1 (MQ=255)
                                                                                                               tAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGACCTACAACGt                            >  2:722275/1‑149 (MQ=255)
                                                                                                                   gCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATg                        >  1:364360/1‑149 (MQ=255)
                                                                                                                    cAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTACCAACAAATGACCAGAACACAGATCTACAACGTAATgc                       >  1:211260/1‑149 (MQ=255)
                                                                                                                     agagCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATgcg                      >  1:602871/1‑149 (MQ=255)
                                                                                                                       agCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCt                    <  1:10206/149‑1 (MQ=255)
                                                                                                                              tcCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACtgt             >  2:1024109/1‑149 (MQ=255)
                                                                                                                              tcCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCACAACACAGATCTACAACGTAATGCGCTGAACtgt             <  2:737991/149‑1 (MQ=255)
                                                                                                                                 cAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCa          <  2:1102024/149‑1 (MQ=255)
                                                                                                                                     ccAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGAt      <  2:1095421/149‑1 (MQ=255)
                                                                                                                                         cGTCTACGAAAATCAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGa  <  2:762191/149‑1 (MQ=255)
                                                                                                                                         |                                                                                                                                                    
ATAAGCCTTTGCCAGTTCCGGGTATTCTTCAGCAGAAAAAGCGGCACCATTGCATTTCAGCCAGCCTGTTGGCGGAGTGGCTGAAGGCCACGGAACCGGGACACCAACAGGTAATGCAGAGCCTTCTCCCAAACCAACGTTTATGAAAATGAAGAAATAACAAGCAAATGGCATCATTCCTGCTTTTACCAGGGGGATTTAACATGCTTATTGGCTATGTACGCGTATCAACAAATGACCAGAACACAGATCTACAACGTAATGCGCTGAACTGTGCAGGATGCGA  >  CP009273/1204938‑1205223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.