| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3180785 | NA (NA) | 62 (0.910) | 51/294 | 0.3 | 96.9% | pseudogene (6/2445 nt) | yqiG | pseudogene; fimbrial export usher family;putative membrane; Not classified; putative membrane protein |
| ? | CP009273 | 3710988 = | 2 (0.030) | coding (319/975 nt) | ghrB | glyoxylate/hydroxypyruvate reductase B | |||||
Only 100 of 140 total aligned reads displayed.
TGCCGCATTGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAT > CP009273/3710840‑3711136 | caaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccac < 2:639811‑M2/1‑1 (MQ=255) aaagaaccttgcagaggcgttcgagcattataacgaatggcatccgcatagggcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCt < 2:667464‑M2/2‑1 (MQ=255) aagaaccttgcagaggcgttcgagcaatataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTg > 2:513702‑M2/147‑149 (MQ=255) aTTGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGAAGTCGCTGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCAAACCGAATTAACAGAAACAGTCACCGAGACGCGGa > 1:243203/1‑146 (MQ=255) tGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtaga < 2:928641‑M1/149‑5 (MQ=255) tGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtaga < 2:402668‑M1/149‑5 (MQ=255) ttgcagaggcgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcgtgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATgg > 1:494472‑M2/140‑146 (MQ=255) gAAAAAATGCCGAAACTGCCTGCCATATCAACGTTCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagact < 1:52682‑M1/146‑7 (MQ=255) gggcgttcgagcattataacgaatggcatccgcatagggcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTgg < 1:834883‑M2/13‑1 (MQ=255) cgttcgagcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGtgttgt < 2:1051913‑M2/19‑1 (MQ=255) gcgggcagtgtaacgaatgggagccgcagagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaaggggttaagtgataacagatgtcgggaaatataggggcaaatccaCTGATGGCGCTGGtgttgt < 1:490328‑M2/19‑1 (MQ=255) ccGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaat > 2:310611‑M1/1‑131 (MQ=255) ccGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctg < 1:9261‑M1/146‑16 (MQ=255) gcattataacgaatgggatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTAc < 1:77155‑M2/23‑1 (MQ=255) gcattataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtatggaactataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGc > 2:333014‑M2/124‑149 (MQ=255) aCTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatcc > 1:180997‑M1/1‑126 (MQ=255) tcttgccACACTAACGATCTCCGGCGGGTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctcca < 1:619911‑M1/143‑24 (MQ=255) ataacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCtcgtc < 2:540865‑M2/31‑1 (MQ=255) aacgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCtcgt > 1:110183‑M2/117‑146 (MQ=255) acgaatggcatccgcatagtgcgctgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCggg < 2:1106225‑M2/34‑1 (MQ=255) gCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAGATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGCTtagactggccccctgaatctccagacaacc > 2:770405‑M1/1‑119 (MQ=255) gaatgccatccgcattgtgcgctgggttatcgcgctccacggtaacatctgcggcagcgggcttgtaatggggtaagtgataacagatttctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCgg < 1:200642‑M2/33‑1 (MQ=255) caccTCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaac < 1:401887‑M1/146‑30 (MQ=255) ggcatccgcatagtgcgatgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTgg < 2:875798‑M2/40‑1 (MQ=255) aTCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgactctccagacaaccaatat > 2:1017469‑M1/1‑114 (MQ=255) cAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaacgaata > 1:1030470‑M1/1‑112 (MQ=255) cAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatca < 2:1121363‑M1/149‑38 (MQ=255) cAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatca < 2:454761‑M1/149‑38 (MQ=255) aaCGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatat > 1:135744‑M1/1‑111 (MQ=255) gcatagtgcgctgggttatcgctcgccaccggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGc < 2:1068203‑M2/47‑1 (MQ=255) gTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATGCTGCTGATGCCCACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagt < 2:381111‑M1/149‑49 (MQ=255) tCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataa > 1:1028384‑M1/1‑100 (MQ=255) ggCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccacacaaccaatatccattaaataagtgat > 2:589730‑M1/1‑98 (MQ=255) gCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgata < 2:380772‑M1/149‑53 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatctaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACggg < 1:668850‑M2/55‑1 (MQ=255) tgggttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACggg > 1:749244‑M2/92‑146 (MQ=255) gggttatcgcgcgccacgggaatatcgtcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatctcggggaagtgccaCTGATGGCGGCGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGt < 1:738313‑M2/56‑1 (MQ=255) tGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagaccaccaatatcacttaaatcagtgatagtct > 2:650970‑M1/1‑93 (MQ=255) ttatcggccgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGc < 2:715801‑M2/62‑1 (MQ=255) ttatcgctcgccacgggaatatctgcggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGc > 2:968161‑M2/88‑149 (MQ=255) aCAATTTTGATGTCGATGCGCTTACCGCCCGAAAAAATCTGCTGATGCACACGCCAACCGCGTTAACGGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaacataccttaaataagtgatagtg > 1:862942‑M1/1‑91 (MQ=255) aaTTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccactatcacttaaataagtgatagtcttaat < 2:635759‑M1/149‑61 (MQ=255) aaTTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttcaataagtgatagtctt > 1:930495‑M1/1‑89 (MQ=255) cttttgATCGCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 2:1022328‑M1/148‑62 (MQ=255) aTTTTGATTGCGATTAGCCTTCCGCCAGAATAATTCTGCGGATGCACACGACAACCGTATTAACAGAAACCGTCGCCGATACGCTTATtagactggcaccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaata < 2:266495‑M1/149‑62 (MQ=255) gccacgggaatatctgcggcagcgggcttgtaatgggttaagtgagaacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGGTGTGGAGGTAGCCGAACGGATAGACGCAGGcgg > 1:614841‑M2/79‑145 (MQ=255) gccacgggaatatctgcggcagcgggcctgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGa < 1:567434‑M2/68‑1 (MQ=255) cacgggaatatctgcggcagcgggcttgtaatgggctaagtgataacagatgtgtggaaatatagtggcaaatccaCTGATGGCGCCGGTGTTGTCTACCGCTCGTCGGGCTGTGGAGGTAGCAGACAGGGTGACAGCAGGCGAAt > 1:557705‑M2/77‑146 (MQ=255) gTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagt > 1:302296‑M1/1‑80 (MQ=255) gTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagc > 1:1051305‑M1/1‑80 (MQ=255) gctgcGCTTACCGCCCGAAAAATTCTGCCGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGACACGCTGATtagaatggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 1:890798‑M1/144‑70 (MQ=255) gATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttt < 1:902541‑M1/146‑70 (MQ=255) gATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaaaaagggataggtttaatactagtttttag > 2:281159‑M1/1‑77 (MQ=255) tctttggcagcgggcttgtaatgggttaagtgataacagatgtctggaaatataggggcaactccaGTGATGGCGGTGGTGTTGTCTACCGCTCGTCGGGTTGTGGGGGTAGCAGGAGGGGTCAAAGCAGGGGAATGGaccgcggg > 1:184700‑M2/67‑144 (MQ=255) cGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactaggttttagactagtca > 1:242537‑M1/1‑66 (MQ=255) cccGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGACACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacgtaaataggtgatagtcttaatactagtttttagactagtcatt < 1:135539‑M1/146‑83 (MQ=255) ccGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggag > 2:141267‑M1/1‑63 (MQ=255) ccGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattg < 1:98952‑M1/146‑84 (MQ=255) gcgggcttgtaatgggttaagggataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGccc < 1:461197‑M2/89‑1 (MQ=255) cGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggaga > 2:586017‑M1/1‑62 (MQ=255) gAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaa < 2:334171‑M1/149‑89 (MQ=255) aaaaTTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 2:85071‑M1/149‑91 (MQ=255) aaTTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacgtaaataagtgatagtcttaatactaggttttagactagtcattggggaaa > 1:193052‑M1/1‑57 (MQ=255) ttgtaatgggttaagtgataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAAGGGACCGCGAGCCTAGGCCCGGGCTg > 1:841102‑M2/52‑146 (MQ=255) aTTCTGCTGATGCACCCGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGCTtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 1:933175‑M1/146‑91 (MQ=255) aTTCTGCTGATGCACACGCCAACCGTATTAACAGAGACCAGCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggggaaca > 1:476619‑M1/1‑56 (MQ=255) aTTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaaca < 1:459595‑M1/146‑91 (MQ=255) taatgggttaagtaataacagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTa > 1:724279‑M2/49‑146 (MQ=255) tgctgATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttcatactagtttttagactagtcattggagaacagatgatt > 2:223764‑M1/1‑52 (MQ=255) ctgATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgat > 1:1027200‑M1/1‑50 (MQ=255) tgATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat < 2:805230‑M1/149‑101 (MQ=255) tgATGCACACGCCAACCGTAGTAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgat < 2:149478‑M1/149‑101 (MQ=255) aTGCACACGCCAACCGTATGAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgc > 1:706753‑M1/1‑47 (MQ=255) tgatcacagaagtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCa < 2:357056‑M2/113‑1 (MQ=255) ggtaacagatgccgggaaagataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCAc < 2:314772‑M2/114‑1 (MQ=255) aacagatgttgggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCAc < 1:590579‑M2/114‑1 (MQ=255) acagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATGGGCCCGGACTGGTACGGCACTGACGTTCCCCATa > 2:351299‑M2/32‑149 (MQ=255) cagatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATaa < 2:309299‑M2/119‑1 (MQ=255) agatgtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATaaa < 2:412882‑M2/120‑1 (MQ=255) gatggctggaaagagaggggcaaatccaCTGATGGCGCTGGTGTTGTGTACCGCTCGTCTGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTTGTACGGCACTGACGTTCACCATa < 1:714861‑M2/118‑1 (MQ=255) tATTAACAGAGTCCGCCGCCTATACGCTGAGtagactggccccctgaagcgccagactaccaatatcacttaaataagtgatagttttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaa < 2:1008552‑M1/149‑119 (MQ=255) gtctggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCataaca < 1:277552‑M2/121‑3 (MQ=255) ttAACAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaa > 1:208306‑M1/1‑29 (MQ=255) tggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCTGTCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGGTCACCATAAAACACTgg > 2:837991‑M2/23‑149 (MQ=255) ggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGCCGTTCACCATAAAACACt > 1:99390‑M2/22‑146 (MQ=255) ggaaatataggggcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTggg < 2:73802‑M2/128‑1 (MQ=255) aCAGAAACCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcag > 2:500173‑M1/1‑26 (MQ=255) aCCGTCGCCGTTACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcg < 2:693994‑M1/149‑130 (MQ=255) aCCGTCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacg > 1:322940‑M1/1‑20 (MQ=255) tCGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacc > 2:660705‑M1/1‑16 (MQ=255) cGCCGATACGCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggaggaacgcagacggcgtaccc > 2:933336‑M1/1‑15 (MQ=255) gcaaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGCTATGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCCCTGACGTTCACCATAAAACACCGGGCACTGTCgg > 1:386612‑M2/10‑146 (MQ=255) ccGATACGCTGATtagactggccccctgaagctccagaccaccgcaacggcgtaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccaca < 2:1118604‑M1/149‑137 (MQ=255) ccGATACGCGGAAtagactggccccctgaatctccagacaaccaatatcactttaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtacc > 1:1045296‑M1/1‑13 (MQ=255) cagtccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATgg < 2:945282‑M2/142‑1 (MQ=255) aaatccaCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATgg < 2:378018‑M2/142‑1 (MQ=255) gtaCGCTGATtagactggccccctgaatctcgagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagacattggagaacagatgattgatgtattagggccggagacacgcagacggccgaccaca > 1:767317‑M1/2‑10 (MQ=255) gCTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagccggcgtaccccacaggaac > 2:494083‑M1/1‑6 (MQ=255) aCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGAc < 1:592214‑M2/145‑1 (MQ=255) cTGATtagactggccccctgaatctccagacaaccaatatcacttaaataagtgatagtcttaatactagtttttagactagtcattggagaacagatgattgatgtcttagggccggagaaacgcagacggcgtaccacacaggaaaa > 2:725325‑M1/1‑5 (MQ=255) | TGCCGCATTGCTGGAAAAAATGCCGAAACTGCGTGCCACATCAACGATCTCCGTCGGCTATGACAATTTTGATGTCGATGCGCTTACCGCCCGAAAAATTCTGCTGATGCACACGCCAACCGTATTAACAGAAACCGTCGCCGATACGCTGATGGCGCTGGTGTTGTCTACCGCTCGTCGGGTTGTGGAGGTAGCAGAACGGGTAAAAGCAGGCGAATGGACCGCGAGCATAGGCCCGGACTGGTACGGCACTGACGTTCACCATAAAACACTGGGCATTGTCGGGATGGGACGGAT > CP009273/3710840‑3711136 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |