New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 1481457 = | 81 (0.690) | 15 (0.130) | 9/538 | 5.9 | 16.9% | coding (549/1293 nt) | ynbD | putative phosphatase inner membrane protein |
? | NC_000913 | 1481724 = | 69 (0.610) | coding (816/1293 nt) | ynbD | putative phosphatase inner membrane protein | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
GGCAGGGCAATGTCAGCCAGTAAACGGCGGGCGGTAGTTTCCCCTGACTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1481752‑1481457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaccgccCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATT > NC_000913/1481724‑1482002 GGCAGGGTAAAGTCAGCCAGTAAACGGCGGGCGGTAGTTTCCCCTGACTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACC < 1:620685/289‑1 ACTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCCGCTACGACATAGGACAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCCAACACGGTAGACGGGCACCATCCCGTCAATCAACATACCTCCCGCCCCCACTTTACTGGCTGACCCTGGCCCGCCGCCATCGGat > 2:590354/1‑287 CTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCCTCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATACTTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACCTACCTACCGCCCGCCGTCTACTTGCTTACATTCCCCTGCCG‑CATCGGagtg > 2:418251/1‑285 CTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATCATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCCGACATTTCCCTGCCG‑CTGCGGGATG > 2:1087410/1‑289 CTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATCCCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATG > 1:832701/1‑289 CTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATG > 2:385181/1‑289 CTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCAACATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGAAGTTGAACAGGTTTCTGGTAATTCCAAAGACGGCTGACGGGCACCATCCAGTCAATCAACATACCTACCCCCCGCCGTTTAGTGGCTGACCTTTCCTAGCCG‑Cctgcggagg > 2:840874/1‑280 GCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCC > 2:241690/1‑230 GCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTAATGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGCTTTGTCGTCGTCGGGAGCatggga > 1:783469/1‑282 TGACCCCCATAACTGAATCATCATCATTAGCTCCATCAATACAAGGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACA < 1:1087410/289‑1 TGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGGGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACA < 1:418251/289‑1 GAGCCCGCGCCTACGACATAGGGAAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGC < 1:840874/289‑1 AGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCCCCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CACCGGGGTGTGG‑CCGTCTTTGCGTTGGTTTTGTCGTCGCATGGAGCCGGGGCGCCAGATGCCTGCTTGTGTTTATTTAGGGGGGTTTCCCCGAAACTTTCCGGCACGGAATGCGGGTCTGGACGTCACCGTTCAACTCCCTCGCG > 2:1047413/1‑289 GCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCCCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTAT < 1:385181/289‑1 ACCTTCCGCCCGCCGGTTATTGGGTGACTTGTGCGTTCCG‑GATCGGG‑TGTGGTTTGTCTATGCGTTTGTTTTGTCGTCTCCTGTGGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATT < 2:458038/289‑1 ACCTACCCCCCGCCTTTTCCTGCGTTCAATTCCCCGGCCG‑CATCGGGATGGGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATT < 2:832701/289‑1 GGCAGGGCAATGTCAGCCAGTAAACGGCGGGCGGTAGTTTCCCCTGACTATCTTTCCCTGTTGTTATCGCGCCAAGCCCACCGTACCCACGGCCAATTATGAGTAGCGATAATACTGGCCAACATAACCAGACTGACCACCATAACTGAATCATCATCATTAGCTCCATCAATACAATGCACGAGCCCGCGCCTACGACATAGGGCAGTGCTATTTTGATTCGACGTTGATCAGGTTTCTGATAATTCCAACGACGGTCGACGGGCACCATCCAGTCAATCAACATACCTACCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1481752‑1481457 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaccgccCGCCGTTTACTGGCTGACATTGCCCTGCCG‑CATCGGGATGTGG‑CTGTCTATGCGTTGGTTTTGTCGTCGCCTGGAGCCGGTGAGCAAAATGACTGCTGGTGTTTATTTAGGGGCGTTTCCACGACATATTCCGGCACAGAATGCGGTTCTGGACGTCACCTTTGAATTCCCTCGCGGACGAGCCACAAAAGATCGACTCTATTTTTGTGTACCGATGCTGGATCTGGTGGTTCCGGAAGAGGGGGAGCTCCGACAGGCCGTGGCGATGCTGGAAACATT > NC_000913/1481724‑1482002 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |