New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1287084	69 (0.890)	4 (0.060)	3/242	11.2	6.1%	noncoding (153/171 nt)	rttR	rtT sRNA, processed from tyrT transcript
	?	NC_000913	= 4175536	63 (0.940)					noncoding (66/85 nt)	tyrU	tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTC  >  NC_000913/1286943‑1287225                                                                                                                                              |                                                                                                                                              cTGCGGCCACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTa                                                                                                                                              <  2:1034486/143‑1 (MQ=255)  tGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCCTGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAttcg                                                                                                                                             >  1:713407/1‑141 (MQ=255)   gCGGCAACGCTCTCTCGCTGAAGCTCAAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACt                                                                                                                                            <  2:355831/143‑1 (MQ=255)        gaCGCTCTCGCGCTGCCGCGCGAGCCGCACGTTGGTCGAAGCTTCTCATCCTTCCCCGCGTCGGCAGAATATTTGATTGCGGATGCGCTTGAGGTTTCAGTGACTTTTGGAAGTGATGGTGGTGGGGGAAGGATTACTCAgcg                                                                                                                                       <  1:455935/142‑1 (MQ=14)          cGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCt                                                                                                                                     >  1:614344/1‑143 (MQ=255)          cGCTCTCTCGCTGACGCTCGAGCAGAACCTTAGACGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATATCTGATTCGCTTGAAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGAGGGAAGGATTCGTCCgcgcg                                                                                                                                     >  1:1097686/1‑142 (MQ=14)             tctctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcg                                                                                                                                  <  1:503245/143‑1 (MQ=255)             tctctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTCGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcg                                                                                                                                  >  1:605287/1‑143 (MQ=255)               tctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCGgagcg                                                                                                                                >  1:435678/1‑143 (MQ=255)               tctcGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgcg                                                                                                                                <  2:447191/143‑1 (MQ=255)                   gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGGAGGATTACTCAGCGCTGCGCGCTTc                                                                                                                            >  2:333454/1‑143 (MQ=255)                    cTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATCTTTGATTGCGGAGTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAGGGATTACGCCGCGCTACGCGGttgg                                                                                                                           >  1:814717/1‑141 (MQ=17)                     tGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGGTGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGc                                                                                                                          >  2:1179774/1‑143 (MQ=255)                     tGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGTGGGAAGGATTAATCAGCGCTGCGCGCTTCGc                                                                                                                          <  2:855744/143‑1 (MQ=255)                     tGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgagattaat                                                                                                                          >  2:489784/1‑135 (MQ=255)                           tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGGGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCCTACGTGCGGCGCGCTTCGCCCCTcc                                                                                                                    >  2:907337/1‑142 (MQ=17)                           tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAGCACGCGCTGCTCGCTTCACCCCTcc                                                                                                                    >  1:1179987/1‑142 (MQ=17)                           tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCg                                                                                                                    >  2:242958/1‑143 (MQ=255)                              aGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCAT‑GGCAGAATATTTGATTGCGGATTCGCTTGCGCGTTCAGGGACCTTTGAAAGTGATGGTGGTGGGGGCAGGATTACACAGCGCGACGCGCCTGGcccgaggggta                                                                                                                >  1:1122463/1‑135 (MQ=14)                                 cGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGTGAGCGCAGCGCACTTGGcgccgcacgtcgc                                                                                                              >  1:674372/1‑131 (MQ=14)                                  gacccTGAGTCGAAGCTTCGCATTGTTCACCGCATTGCCAGAATATTTGATTGGGGATGCGTTTGAGGGTTCGGGGATTTTTGGAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                             <  1:564152/140‑1 (MQ=11)                                  gAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGGGAGTTCAGGGACTGTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTGCGCCCTGCGGGACGtt                                                                                                             >  1:82985/1‑143 (MQ=17)                                  gAACCGTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                             <  2:278267/143‑1 (MQ=255)                                      cTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCGGCGCGCTTCGCCCTTCGGGTCgaggctt                                                                                                         >  2:677253/1‑137 (MQ=255)                                           tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTTTGAGAGTTCAGGGACTTTTGGAAGTGATGGTGGTGGGGGAAGGATTACTCGGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGc                                                                                                    <  2:606947/143‑1 (MQ=255)                                                 cgtctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGct                                                                                              <  2:1329932/141‑1 (MQ=255)                                                 cTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGct                                                                                              >  1:1329932/1‑143 (MQ=255)                                                   tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctct                                                                                            <  2:927840/143‑1 (MQ=255)                                                   tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctct                                                                                            >  2:1227787/1‑143 (MQ=255)                                                     tcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACGCCGCGCTGCGCGGATGGCCGTTGGGGGCGTTGCCTGCGGCCACGgtcgct                                                                                          >  1:242757/1‑143 (MQ=14)                                                      cATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTCCGCCACCGCcctctc                                                                                         >  2:538608/1‑143 (MQ=255)                                                       aTCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCg                                                                                        >  2:405720/1‑143 (MQ=255)                                                         ccTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGTCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGAGCTGCGCGTTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGcg                                                                                      >  2:431378/1‑142 (MQ=255)                                                           ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTTGGGGAAGGATTAGTCCGCGCGACGCGCTTCGCGGCTCGGGTCGGTGCTGGCGGCAACGcccgcccggggg                                                                                    >  1:1178678/1‑132 (MQ=14)                                                           ttCCCCGCATGGGCAGAATATTTGATTGCGGAACTGTTTGAAAGATCAGGGACTTTTGAAAGTGATGGTGGTGGTGGGAGGAGTACTAAGCGCGACGCGCGTCGCGCCTCGGGTCGAGGCCGGCGCCAACGcccgcgcgcgac                                                                                    >  1:1179553/1‑132 (MQ=2)                                                              cccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgcgc                                                                                 >  2:233203/1‑143 (MQ=255)                                                               ccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGgcgca                                                                                >  2:755144/1‑142 (MQ=255)                                                                 gCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCg                                                                              <  2:614344/143‑1 (MQ=255)                                                                        cAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGaa                                                                       >  2:27184/1‑143 (MQ=255)                                                                               tttGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGGGGGGGGAGGATTACTCAGCGCTACGCGCTTCGCCCGTCGGGTCGTTGCCTGCGGCAACGCTATCTCGCTGGCACGCGAGGCGAACCTTGGt                                                                >  1:933037/1‑143 (MQ=17)                                                                                  gATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGa                                                             >  2:218762/1‑143 (MQ=255)                                                                                     ggCGGATTCGCCTGAGCGTTCAGGGGCTGTTGAAAGTGATGGTGGTGGGGGGAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGc                                                          <  1:449524/142‑1 (MQ=14)                                                                                        ggATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTtc                                                       <  2:719363/143‑1 (MQ=255)                                                                                        ggATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACATAGGTCGAAGCGtc                                                       >  2:375855/1‑143 (MQ=255)                                                                                          aTTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTgctc                                                     >  2:161733/1‑143 (MQ=255)                                                                                           ttCGCTTGAGTGGCCAGCGCCTTTTGAGAGTGATGGTTGGTGGGGAAGGATTGCCCCGCGCGGCGCGCTCCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCa                                                    <  1:242958/143‑1 (MQ=14)                                                                                           ttCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCa                                                    <  2:605287/143‑1 (MQ=255)                                                                                              gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATcc                                                 >  2:640020/1‑143 (MQ=255)                                                                                              gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCACTTCGGGTTGTTGCTTGAGGAGTAGATTTCGCTCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCGTcc                                                 >  2:922753/1‑143 (MQ=17)                                                                                              gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGGGGGGGAAGGATTAGTCAGCGCTGAGCGCTTCGCCCTTGGGGTCGTTGCCTGCGGCAACGGCCGCTCGCTGGCGCTCGACGCGATCATTGGACTCAGAGTCTCATcc                                                 >  1:21754/1‑143 (MQ=14)                                                                                                  gagaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGCAGCTTCTCATCCTTcc                                             >  2:752207/1‑143 (MQ=255)                                                                                                       ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCa                                        >  2:1076730/1‑143 (MQ=255)                                                                                                        tCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCGGTTGGGGTCGTTGCCTGCGGCACCGCCCTCTCGCTGGCGCTTGGCGCGGACCCTCGTCGTCGGGGCTCATGCTTCCCCGcgg                                       >  1:867160/1‑141 (MQ=2)                                                                                                          cggggcTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCa                                                    >  1:762497/6‑128 (MQ=18)                                                                                                          cggggCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCa                                                    <  2:762497/127‑1 (MQ=25)                                                                                                           gggggcgtggcgggtggtgGGGGTGGGGGAGGGATTGCTCGGCGCTGCGCGCTTCGGCCTGCGGGTCGTTGCCTGCGGCAGCGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATggg                                    <  1:1024330/130‑1 (MQ=11)                                                                                                            ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGATGCTTCTCATCCCTCCCCGCATGGGc                                   >  2:239236/1‑143 (MQ=255)                                                                                                            ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGc                                   <  2:1027342/143‑1 (MQ=40)                                                                                                             gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGGACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCa                                  >  2:614315/1‑143 (MQ=255)                                                                                                             gACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCCTGGTCGAAGCTTCTCATCCCTCCCCGCACGGGCa                                  >  1:1135825/1‑143 (MQ=255)                                                                                                                ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGGTCCCTCGCTGGCGCGCGCGCGGAACGTGGGTCGAACGTCGTCATCCTCccccccggggccatga                               >  1:992417/1‑131 (MQ=11)                                                                                                                ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGGCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGACAgga                               >  2:478699/1‑141 (MQ=255)                                                                                                                ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGATTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGACCCTTGGTCGAAGCTTCCCACCCTTCCCCGCCTGGGCAgcg                               >  1:94512/1‑141 (MQ=11)                                                                                                                     aaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAttt                          >  2:274919/1‑143 (MQ=38)                                                                                                                       aGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAAGATTTaa                        >  2:1184282/1‑143 (MQ=255)                                                                                                                             ggtggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCgg                  <  1:171571/143‑1 (MQ=17)                                                                                                                                ggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGACCCTTGGTCGAAGCTTCTCATCCTTCCCCGCCTGGTCAGCGTAGTTTATTGCGCAtt               >  2:607620/1‑143 (MQ=11)                                                                                                                                    ggggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGtt           >  2:292899/1‑143 (MQ=38)                                                                                                                                     gggAAGGATTACTCTGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTg          <  2:64852/143‑1 (MQ=255)                                                                                                                                      ggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGCCGAACCTTGGTCGAAGCTTCTCATCCTTcc                                             >  2:748336/1‑107 (MQ=17)                                                                                                                                             ttACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAATAAATAGAGGATACAATGGGAAGTTc  >  2:367336/1‑143 (MQ=14)                                                                                                                                              |                                                                                                                                              CTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTC  >  NC_000913/1286943‑1287225

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.