| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 48 [0] | [0] 48 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 48 (0.770) | 42/282 | 0.5 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001789 | tatggattgattctgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatctc < 2:960867‑M2/3‑1 (MQ=255) gattgatcttctcgatccggacgacgacgatcgactgcgcgtacaatctgaacttggccagcgcctggcaatccgcccgtaacttgatgacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttc < 2:111211‑M2/7‑1 (MQ=255) atcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttctt > 1:979153‑M2/132‑143 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgcacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttcttcttc < 2:425154‑M2/13‑1 (MQ=255) ttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtatctttgaagacgacgacagcctgcatCTCcttcttcatctt > 1:738501‑M2/129‑143 (MQ=255) cggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGc < 2:670979‑M2/24‑1 (MQ=255) ggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCg > 1:59087‑M2/119‑143 (MQ=255) acgacgagcgacggcgcgtacaatgtgaacttggacagagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctggatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa < 2:573559‑M2/30‑1 (MQ=255) cgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:1012742‑M2/38‑1 (MQ=255) cgactgcgcgtacaatctcaccttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:468226‑M2/38‑1 (MQ=255) cgactgcgcgtacaagctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCg < 1:935904‑M2/38‑1 (MQ=255) gactgcgcggacaatcggaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCgg < 2:887999‑M2/39‑1 (MQ=255) gtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTGCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCa > 1:955407‑M2/97‑143 (MQ=255) acaatctgaacttggctagtgtctttcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACt < 1:16318‑M2/49‑1 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGACGATCACGCCGGTCACTCCACtgt > 2:794789‑M2/93‑143 (MQ=255) atctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACtgtg > 1:591138‑M2/92‑143 (MQ=255) ctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATGACGCGGGTAACGAGACTGTGGc > 1:710642‑M2/90‑143 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGGAGATCACGCCGGTCACTCCACTGTGGCATTtaa > 1:106110‑M2/84‑142 (MQ=255) ttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCGCTGTGGcattttc > 1:988347‑M2/84‑141 (MQ=255) gtggccagagccgggcaacccgcccggaactggaagacatcgaagcatcggcacgtctctttgaagacgacgacggcccgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGTATTTAc < 1:432955‑M2/60‑1 (MQ=255) cagagccttgcaatcctctcgtatcttgaatatatcgaagcatcggcacggttcttggaagacgacgacggcctgcatCTCCTTCTGCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATcc < 1:742498‑M2/65‑1 (MQ=255) agcctggcggtccgcccggacctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGTGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTg < 2:874535‑M2/68‑1 (MQ=255) gcccggcaacccgcccggaactggaagacagcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 1:175253‑M2/69‑1 (MQ=255) ctcgtggcccgccctgaactggaagacgtcgaagcatcggcacgtttctttgaagacgacgactgcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 2:524171‑M2/71‑1 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc > 1:182172‑M2/72‑103 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATc < 2:182172‑M2/32‑1 (MQ=255) cccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCt < 1:343205‑M2/78‑1 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 1:240803‑M2/65‑143 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTg > 2:33511‑M2/65‑143 (MQ=255) ccggaactggaagacatcgacgcatcggcacgtttgtttgaagacgacgacggccggcatCGCCTTCTTCTTCTTTGAAGAGCCTGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 1:20495‑M2/83‑1 (MQ=255) aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTGCCATCCGCGATGGTCGCCTGTTTActct > 2:1071571‑M2/57‑143 (MQ=255) ctggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 1:751399‑M2/89‑1 (MQ=255) tggcagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTCACTCTgcg > 1:87847‑M2/54‑143 (MQ=255) tggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGGTGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTGTTTACTCTgcg > 2:855074‑M2/54‑143 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtg < 2:979153‑M2/92‑1 (MQ=255) agacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgag > 2:729724‑M2/50‑143 (MQ=255) gcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGc < 2:41148‑M2/104‑1 (MQ=255) cggcacgtttctttgacggcgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGACCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTCCTCTGCGTGAGCGTGAACTGCCcgg > 2:957202‑M2/36‑142 (MQ=255) cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGCAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCGTCCGTGCTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACtgcccca > 2:792552‑M2/36‑141 (MQ=255) gcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGGGCGTGAACTGCCGGctg > 1:55950‑M2/34‑142 (MQ=255) ttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAGGATGCGGAAGGACACGCCGGTAACTCCACTGTGGCATTTACCATCCTTGTTGGTCGGCTGTTTACTCTGAGTGAGCGTGAACGGCCCGCTTTtcgcg > 2:176971‑M2/28‑141 (MQ=255) tttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTCCATCTGt > 1:88608‑M2/25‑143 (MQ=255) aagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGCTGGTCGTCTGTTTACTCTCCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCg > 2:735850‑M2/21‑143 (MQ=255) acgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGACCGTCAAAAGTCCGCTTTTCGTCTGTATCGTATGCg < 2:955407‑M2/129‑1 (MQ=255) acgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCGCTTTACTCTGCGTGAGCGTAACCTGCCCCCTGCTCGTCTGTCTCGTCTGCg > 2:35236‑M2/15‑143 (MQ=255) cgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACGATCCGTGATGGGCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTGTCGTATGCGt > 1:133907‑M2/14‑143 (MQ=255) tgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGGCTGTTTACTCTGCGTGTGCGTGAACTGCCTGCTTTTCGACTATATCGAATGAGTGCCGGTAg > 1:333412‑M2/6‑143 (MQ=255) atCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTGTGCGTGCCCGTGgccg > 1:97388‑M2/3‑142 (MQ=255) | ATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAGCCA > NC_000913/4001509‑4001789 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |