New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1104930114 (1.540)3 (0.040) 3/264 10.8 2.7% intergenic (+28/‑31) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
?NC_000913 = 1104934 107 (1.540)intergenic (+32/‑27) csgA/csgC curlin subunit, amyloid curli fibers, cryptic/curli assembly protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

AAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTC  >  NC_000913/1104792‑1105072
                                                                                                                                          |                                                                                                                                                
aaaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCaa                                                                                                                                             <  2:607705/143‑1 (MQ=255)
 aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTTCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAg                                                                                                                                            >  2:348029/1‑143 (MQ=255)
    aggtCGGTGGTGGCAACGGTGCTGCAGTTGACTAGACTGCATCTAACTCCTCCGTCAACGTGACGCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTACTACAGAGACAGGGC‑GCaacgac                                                                                                                                         >  1:1239605/4‑139 (MQ=255)
    aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGccc                                                                                                                                         <  2:971557/143‑1 (MQ=255)
      ttCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCGCTg                                                                                                                                       >  1:301278/1‑143 (MQ=255)
        cGGTGGTGGCGACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGtt                                                                                                                                     <  1:1042588/143‑1 (MQ=255)
         ggtggtGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGttt                                                                                                                                    <  2:603373/143‑1 (MQ=255)
              tggAAACGGAGCAGCAGTAGACCAGACTGCATCTAACTCCTCCGCCAACGAAACTCATGTGTGCTTTGGCAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGtttttttt                                                                                                                               <  2:590441/143‑1 (MQ=255)
               ggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTc                                                                                                                              <  1:1288566/143‑1 (MQ=255)
                gccaCGGGGCTGCGGTTGACCGTACTGCATTTTACTCCTCCGTGACCGTGAGTCAGGTTGGCTTTGGTAACATCGCGACTGCTCATCAGTTCTAAGACATCTGTTGTTTTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                             <  1:340343/140‑1 (MQ=255)
                gCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                             >  1:663408/1‑143 (MQ=255)
                gCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCg                                                                                                                             <  2:928943/143‑1 (MQ=255)
                 cAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCgg                                                                                                                            <  1:1134884/143‑1 (MQ=255)
                  aaCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCggc                                                                                                                           >  1:822520/1‑142 (MQ=255)
                   aCGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCGCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGga                                                                                                                          <  2:1012994/143‑1 (MQ=255)
                      gTGCTGCACGTGACCAGACTGCAGCTAACGCCTCCGTCAACGTGCCTCAGATAGTCCTTGTTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGagaa                                                                                                                       <  1:447529/143‑1 (MQ=255)
                         ctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGCGAgaagaa                                                                                                                    <  1:523061/143‑1 (MQ=255)
                           gcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAata                                                                                                                  <  2:955968/143‑1 (MQ=255)
                            aatttGACCCGACTGCATCTAACTCCACCGACAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAatat                                                                                                                 <  1:1265793/140‑1 (MQ=255)
                             aGTTGTCCAGACGGCATCTATCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTA‑TACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGa                                                                                                               <  1:408071/143‑1 (MQ=255)
                              gTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGa                                                                                                               >  2:1105548/1‑143 (MQ=255)
                                tGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAAt                                                                                                             <  1:930487/143‑1 (MQ=255)
                                       aCTGCATCTAACTCCTCCGTCAACGTGCCGCGAAATGGCTGTTTGAACAACGCGACCGCTCAGCAGTACTAATACAACTTTGCAATGACAGAAACAGTGC‑GCAATCCGTGCTTTATGTCGGTAGAAGAATATGAAAAcatcat                                                                                                      >  1:981310/1‑138 (MQ=255)
                                         tGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACCGAGACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAGGATGTATACGtcatca                                                                                                    >  2:402165/1‑141 (MQ=255)
                                          gCATCTAACCCCTCCGGCACCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTAc                                                                                                   <  1:856648/143‑1 (MQ=255)
                                                aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACAGATCATCAGAACTAATCTATATGAACTTTTTCTGAAACAGGGC‑GCAAGAACAGTTCTTTTTCGGGAGAGCAATATGAGTAAGtttttagtatttg                                                                                             >  1:1126662/1‑136 (MQ=255)
                                                   tcctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg                                                                                          <  1:461164/143‑1 (MQ=255)
                                                    cctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGATCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATGTGAATACGTTATTACTCCTTGCAGc                                                                                         >  1:34160/1‑143 (MQ=255)
                                                    cctccGTCAACGTGACGCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGAATTACAGAAACAGGGG‑GCAAGCCCGGTTGGTGTGCGGGAAAAGAGTATGAATAAGTCATTACTCAGTGCGGc                                                                                         >  1:616410/1‑143 (MQ=255)
                                                     ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                                                                        <  1:433559/143‑1 (MQ=255)
                                                     ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa                                                                                        <  1:532013/143‑1 (MQ=255)
                                                      tccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTCGTATTACAGAAACAGAGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGACATTACTCCTTGCGGCAc                                                                                       >  1:982922/1‑143 (MQ=255)
                                                      tccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCACTTGAATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc                                                                                       >  2:1127729/1‑143 (MQ=255)
                                                        cGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt                                                                                     >  2:714971/1‑143 (MQ=255)
                                                        cGTCAACGTGACTCAGGTTGGCATTGATAACAACGCGACCGCTCACAAGTACTAATAAATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTATTTTACGGGAAATGAATATGAATACGTTATTACTCCTTGCGGCACtt                                                                                     <  1:1056438/143‑1 (MQ=255)
                                                          tCATCGTGACACAGGTTGGCTGGGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                                   <  2:468679/143‑1 (MQ=255)
                                                          tCAACGTGACTCAGGTTGTCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTc                                                                                   <  1:356149/143‑1 (MQ=255)
                                                          tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAACACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCCCtctc                                                                                   >  2:10730/1‑143 (MQ=255)
                                                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                 <  2:281440/143‑1 (MQ=255)
                                                            aaCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                 <  1:195728/143‑1 (MQ=255)
                                                            aaCGTGACGCAGGAGGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa                                                                                 <  2:145082/143‑1 (MQ=255)
                                                             aCGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGCAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCATGCGGCACTTTCGAg                                                                                >  2:960438/1‑143 (MQ=255)
                                                              cGTGACTCAGGTTGGCTTGGGTAACAACGCGGCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGt                                                                               >  2:901920/1‑143 (MQ=255)
                                                               gTGCCTCAGGTTGGCTTTGGTAACAACGCGACCGCTCCTCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                                                                              <  2:629104/143‑1 (MQ=255)
                                                               gTGACTCATGGTGGCTTTGGTAACAACGCGACCGCTCATCATTTCTAATACATTATTTGTATTATAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc                                                                              <  2:252500/143‑1 (MQ=255)
                                                               gTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTCGCGGCACGTTCCAgcc                                                                              >  1:717896/1‑141 (MQ=255)
                                                                    tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTCATGAATGAATAGAAGGACAGAAAAAGGGG‑CTGCACCCGGTGCTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                         >  2:297401/1‑143 (MQ=255)
                                                                    tCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATa                                                                         >  1:926022/1‑143 (MQ=255)
                                                                      aGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc                                                                       <  1:119483/143‑1 (MQ=255)
                                                                       ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTGCTCCCTGCGGCACTTTCCAGTCacctcacc                                                                      >  2:687800/1‑136 (MQ=255)
                                                                        gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATAGAACAGTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCTGGAGAAGAATATGAATACGTTATTACTCCTTGCGAACATATCCAGACAAATAACCt                                                                     >  1:705735/1‑143 (MQ=255)
                                                                          tGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAACAGAATATGAATTCGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt                                                                   <  2:1229302/143‑1 (MQ=255)
                                                                           ggCTTTGGTATAAACTCGACCGCTCATCAGTATTACTCGATCATTTGTATGACAGAAACTGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGTAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTGTa                                                                  <  1:351559/143‑1 (MQ=255)
                                                                           ggCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTa                                                                  <  1:16850/143‑1 (MQ=255)
                                                                           ggCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTa                                                                  <  2:1050670/143‑1 (MQ=255)
                                                                            gCTTTGGTGACAACGCGACCGCCGAGCGGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa                                                                 <  2:283446/143‑1 (MQ=255)
                                                                             cTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAGCAGGGC‑GCAAGCCAGGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTACGGCCCTTTCCTGTccagttacatttgat                                                                >  1:735206/1‑129 (MQ=255)
                                                                              tttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAGCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa                                                               >  2:668941/1‑143 (MQ=255)
                                                                              tttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATAAGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAAtc                                                               >  2:222044/1‑142 (MQ=255)
                                                                                tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTTTTTTTTTTATTATGAATACGTTGTTACTCCTTGCGGCACTTTCCAGTCAGATAACGTTTAATGCg                                                             >  1:346609/1‑143 (MQ=255)
                                                                                  gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTATTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTATCCAGTCAGATACCCTTTAATACGAc                                                           >  1:666428/1‑143 (MQ=255)
                                                                                    aacaacGCGACCGTGCATCGTTACTAATACATCATTTGTATGACAGAAACAGGGC‑GCAAGCCCTGTTTGTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAcc‑c                                                        <  1:444939/143‑1 (MQ=255)
                                                                                       aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGtta                                                                                                       <  1:134907/94‑1 (MQ=255)
                                                                                       aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGtta                                                                                                       >  2:134907/1‑94 (MQ=255)
                                                                                       aacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAAAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGc                                                     >  1:696081/1‑143 (MQ=255)
                                                                                         cgcgACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTCATACGACC‑CAGCaa                                                   >  2:948501/1‑143 (MQ=255)
                                                                                          gcgACCGCTCCTCAGTACAAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAg                                                  <  2:1177886/143‑1 (MQ=255)
                                                                                             acggCTCATCGGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAgggg                                               <  2:509871/140‑1 (MQ=255)
                                                                                             aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAgggg                                               >  2:758127/1‑143 (MQ=255)
                                                                                             aCCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGAAATTAACAGCCAGATAACCTTTAATACGACC‑CAGCAAgggg                                               >  2:1218566/1‑143 (MQ=255)
                                                                                              ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAgggca                                              >  1:195448/1‑141 (MQ=255)
                                                                                               cGCTGATCAGTACGAATACATGATTTGTATGACAGAAGCGGGGC‑GCAAGCCCTGTTTTTTTGCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGAt                                             <  1:348029/143‑1 (MQ=255)
                                                                                                gCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGaag                                            >  2:1015108/1‑141 (MQ=255)
                                                                                                 cTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGAtgt                                           <  1:529418/143‑1 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATCCGACC‑CAGTAAGGGGAtgtg                                          >  1:1203876/1‑143 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGAtgtg                                          >  2:819396/1‑143 (MQ=255)
                                                                                                  tcatcaGTACTAATACATCATTTGTAGTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGAtgtg                                          <  1:873077/143‑1 (MQ=255)
                                                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGACCTGTTTTTTTTCGTGAGAAGAATATGAATACGTTAGTACTCCTTGTGGCACTAGTCAATCACTGAACCTTTAATACGACC‑CAGCAACGGGAtgtgca                                        >  1:1251060/1‑141 (MQ=255)
                                                                                                    atcaGTACTAATACATCATTTGTATTACAGAAACAGGAC‑GCAAGAACTATTATTTTTCAGGAGAAGAATATGAATACGTTATTACTCCTTGAGACACATTCAAGTCATATAACATTTAATACAAAC‑CAGCAAgaagaattata                                        >  1:1053209/1‑133 (MQ=255)
                                                                                                      taGTAATAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCACCTAATAATGCGTGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGtata                                      <  2:1281744/142‑1 (MQ=255)
                                                                                                      caGTACTAATACATCATTTGTATTACAGAAACCGGGC‑GCGCGCCCTCTAATTCTGTGGGATAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGtata                                      <  2:1281765/143‑1 (MQ=255)
                                                                                                            tAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACCACCACAG‑AACGGCATGGGTATACCatta                                >  1:696550/1‑143 (MQ=255)
                                                                                                                  atcatTTGTATTACAGAAACAGGGC‑GCACGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGCGATGTGTATACCATTATTCCTg                          >  2:519033/1‑143 (MQ=255)
                                                                                                                  atcatTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAACTTTAATACGACC‑CGGCAAGGGGATGTGTATAGCattgtagctg                          >  2:210073/1‑136 (MQ=255)
                                                                                                                   tcatTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCACGGGGATGTGTATACCATTATGCCTGa                         >  2:469158/1‑143 (MQ=255)
                                                                                                                    catTTGTATTACAGAAACAGGTC‑TCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCTAGGGGATGTGTATACCATTATTCCTGaa                        <  1:268840/143‑1 (MQ=255)
                                                                                                                     atTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAg                       >  1:306689/1‑143 (MQ=255)
                                                                                                                      tttGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGCCC‑CAGCAAGGGGATGTGTCTAACaatatagctggagg                      >  2:208176/1‑134 (MQ=255)
                                                                                                                      tttGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGt                      >  2:413728/1‑143 (MQ=255)
                                                                                                                       ttGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGGTGTGTATACCATTATTCCTGAAGTc                     >  1:430619/1‑143 (MQ=255)
                                                                                                                         gTATTACAGAAACAGGGC‑GCAAGCGCTGTTTTTTTGCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAc                   <  2:90150/143‑1 (MQ=255)
                                                                                                                           aTTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActc                 <  2:663408/143‑1 (MQ=255)
                                                                                                                              aCAGAAACGGGGC‑GCAAGCCCGGTTTTTTTTCGGGAGAAGAGTATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTa              <  2:558133/143‑1 (MQ=255)
                                                                                                                                gagcagaGGGCGGCAGGCCCTGTGGTGTTTCGGGAGAAGAGGATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTAc             <  1:136748/137‑1 (MQ=255)
                                                                                                                                  aaaCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGTAGAATATGCATACTGTAGTACTTCTTGCGGCACTTTCCAGTCAGATAACCTTTTATTCGGCC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa          <  1:842589/143‑1 (MQ=255)
                                                                                                                                  aaaCAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGCAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAATCACTCTTACTCa          >  1:544726/1‑143 (MQ=255)
                                                                                                                                      aGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGGATACCATTATTCCTGAAGTCACTCTTGCTCAGTCt      >  2:4719/1‑143 (MQ=255)
                                                                                                                                       gggC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCCTTCTTCCTGAAGTCACTCTTACTCAATCtt     >  2:376666/1‑143 (MQ=255)
                                                                                                                                       gggC‑GCAAGCCCTGTTTTTTTTCGAGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt     <  1:1041017/143‑1 (MQ=255)
                                                                                                                                          c‑gcAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGCGTATACGATGATTCCTGAAGTCACTCTTACTCAATCTTGTc  <  2:664852/143‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                                
AAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGC‑GCAAGCCCTGTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACC‑CAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTC  >  NC_000913/1104792‑1105072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.