| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 1 (0.020) | 35 (0.840) | 32/284 | 0.3 | 97.2% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 1 (0.020) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCG > NC_000913/4001501‑4001783 | ctggctGGATTTATCTTTTCGATCCGGACGACGAGGGGCGATTGCGCGTACAATCTGAACTTGGCTAGAGCCTGGCAAGCCTCTCGTAACTGGCAGACATCGAAGCATCGGCACGTTTCTTTGAAGACTACAACGGCCTGCat < 2:151686/138‑1 (MQ=255) gcagtttgctctCGTCGAAGCTGACAACGCCGAGCGACTGCTCGTACAATCTGAACTTGGCCAGAGCCTGGCACCCCGCCCGGAACTGGAATACATCGAAGCATCGGTACGTTTCTTTGAAGACGACGACGGCCTGCATctcc < 2:212600‑M1/138‑5 (MQ=255) attactcttgtCTACCCGGACGACGACGAGCGACTGCGCGTCCAACCCGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttct < 1:345550‑M1/138‑9 (MQ=255) tCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttc > 1:424931‑M1/1‑130 (MQ=255) ccgAACCGGACGACGGCGAGCGACTGCGCGTACAATCTGAACCTGGCCAGAGCCTGGCAGCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttga < 1:464990‑M1/142‑19 (MQ=255) cGACCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:81461‑M1/143‑20 (MQ=255) cGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaa < 1:581910‑M1/143‑20 (MQ=255) aaCCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaaga < 1:238631‑M1/143‑22 (MQ=255) cgacgacgaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaa < 1:352261‑M1/143‑29 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctcctttgaagatgcggaagatcacg > 2:466608‑M1/1‑108 (MQ=255) gaGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttctccttctctgaacatgcggaacgtcacg > 2:584716‑M1/1‑108 (MQ=255) gACTGCGCGGACAAGCTGAAGTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccgg < 1:316637‑M1/143‑40 (MQ=255) gcgTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgacgctgcggacggtcacgccggtagctg > 1:296069‑M1/1‑98 (MQ=255) aTCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtg < 1:237793‑M1/143‑53 (MQ=255) cTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgtggaagatcacgccggtaactccactgtggc > 1:395295‑M1/1‑89 (MQ=255) tGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGCAGCATCGGCACGTTTCTTGGAAGACGACGACGGCCTGCATctccttcttcttctttgaagaggcggaagatcacgccggtaaagccactgagcgc > 1:670761‑M1/1‑88 (MQ=255) cccgagcctGGCAACCCGCCCGGAACTGGACGCCATCGACGCATCGGCACGTTTCTTTGAAGACGACGACCGCCTGCATctccttcttcttctttgcagatgcggaagatcacgccggtaactccactgtggcatttaccatc < 1:176229‑M1/140‑65 (MQ=255) cAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatcc > 2:517973‑M1/1‑78 (MQ=255) gagCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgt < 1:176889‑M1/143‑68 (MQ=255) aaCCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGGTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttcttggaagatgcggaagatcacgccggtaactccactctggcatttaccatccgtgatggtcgt < 2:694786‑M1/143‑77 (MQ=255) cccgcccgGAGCGGGAAGACATCGAAGCATCGGCACGTTTCTTTTAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtct < 2:402298‑M1/143‑79 (MQ=255) ccgGAACTGGAAGACATCGAAGCATCGGCACGTTTCTCTACCGACGACGACCGCCTG‑‑‑A‑‑CTCTCCTTCTTCTTCGTTGAAGATGCGGCCCATCCCGCCGGCCACTACACGGCGGCATTCGCCACCCGCGACGgccgccacacta > 2:614812/1‑135 (MQ=255) gAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgcgatggtcgtctgtttactc > 2:531430‑M1/1‑57 (MQ=255) aaCTGGAAGACAGCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactct < 1:111158‑M1/143‑88 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgt < 1:13540‑M1/143‑92 (MQ=255) ggAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcgtctttgaagatgcggaagatcacgccggtacctccgctgtggcatttgccatccgtgatggtcggctgtttactctgcgt > 1:549282‑M1/1‑52 (MQ=255) gACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagc > 1:252733‑M1/1‑48 (MQ=255) aTCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatacgtgatggtcgtctgtttactctgcgtgagcgtgaac > 1:177761‑M1/1‑45 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgtggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 2:395295‑M1/143‑111 (MQ=255) gCACGTTTCTTTGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgctt < 2:675406‑M1/143‑111 (MQ=255) cTTTGAAGACGACGCCGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtacctccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctg < 1:315235‑M1/143‑119 (MQ=255) tttGAAGACGACGACGGCCTGCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttctcggctgt > 1:177128‑M1/1‑24 (MQ=255) acgacgtcgGCCTGCATctcctttttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctatttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtat < 1:696586‑M1/143‑127 (MQ=255) tgcgtcggcctgCATctccttcttctgccttgacgttgcggcagctctcgccggtacctcctctgtggcacttaccctccgtgatggtcgtctgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgc < 2:722643‑M1/138‑129 (MQ=255) gcggCATGCATctccttcttcttctctgaagatgcggaagatcacgccggtaactcccctgtggcatttaccatccgtgatggtcgtttgtttactctgcgtgagcgtgaactgcccgcttttcgtctgtatcgtatgcgtgc < 1:145406‑M1/142‑133 (MQ=255) gCATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgcgcgtgaactgcccgcttttcgtctgtatcgtatgcgcgcccgtagc > 2:615002‑M1/1‑4 (MQ=255) cATctccttcttcttctttgaagatgcggaagatcacgccggtaactccactgtggcatttaccatccgtgatggtcgtctgtttactctgcgtgagcgtgaaatattcgctgcccgtctgtatcgtatgcgtgcccgttgcc > 1:302224‑M1/1‑3 (MQ=255) | CAGTATGGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCG > NC_000913/4001501‑4001783 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |