New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1293032 =4 (0.060)71 (1.060) 55/284 0.1 94.7% intergenic (‑110/‑495) hns/tdk global DNA‑binding transcriptional dual regulator H‑NS/thymidine kinase/deoxyuridine kinase
?NC_000913 = 1979270 NA (NA)intergenic (‑55/‑483) insA/uspC IS1 repressor TnpA/universal stress protein

Only 100 of 146 total aligned reads displayed.

GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173
                                                                                                                                              |                                                                                                                                             
gcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatcgacacagaagccactggagcacctcaaacacaccatcatacactaaatcagtaagttggcagcatcacct                                                                                                                                               <  1:12981‑M1/1‑1 (MQ=255)
gATGTTGTTCAGAATTTTGAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTAttt                                                                                                                                               <  1:608067/143‑1 (MQ=255)
  gctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagacgccactggagcacctcaaaaacaccatcatacaatcaatcagtaagttggcagcatcaccTtg                                                                                                                                             <  1:947443‑M1/3‑1 (MQ=255)
   gttgttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTtgt                                                                                                                                            >  2:680952/1‑143 (MQ=255)
      gttCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTCAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTCTGTgcc                                                                                                                                         >  2:11383/1‑143 (MQ=255)
        tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                       >  1:528526‑M2/1‑142 (MQ=255)
        gcggaatTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTGTATTGGGGTGGTTTGTTGAGTTAAGAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                       >  1:602548‑M2/4‑142 (MQ=255)
         tccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTgccgcc                                                                                                                                      <  1:228567‑M1/10‑1 (MQ=255)
         cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                      >  1:1059091‑M2/1‑141 (MQ=255)
          aGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCACTAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTCTTTTCTGCCGggc                                                                                                                                     <  1:142779‑M2/143‑4 (MQ=255)
             aTTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaat                                                                                                                                  >  2:93763‑M2/1‑137 (MQ=255)
              ttttAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatg                                                                                                                                 <  1:1131307‑M2/143‑8 (MQ=255)
              cggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCaataa                                                                                                                                 <  2:1022462‑M1/15‑1 (MQ=255)
               ggtgcgttggccggtccgcaccgccccgtcagtagctgaacagtagggacagctgatagaaacagaagccactggaggacctcaaaaacaccatcatacactaaagcggtaagttggcagcatcaccTTGTGCCGCCaataaa                                                                                                                                >  2:511406‑M1/128‑143 (MQ=255)
                 tgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcagctcaaaaacaccatcatacaataaatcagtaagttggcagcaacaccTTGTCCCGCCaataaata                                                                                                                              <  1:943126‑M1/18‑1 (MQ=255)
                  cgggtcttcgcTCATTGTAGTAATCTCAAACTTAGAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATGCAGTTGTGCAATAGCCAGCAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactc                                                                                                                             >  1:409981‑M2/6‑132 (MQ=255)
                  aaGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTACATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTAAAAATTGTTCTTTATTTTGTGCCGcgtaatgactc                                                                                                                             <  1:1028935‑M2/143‑12 (MQ=255)
                   aGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcc                                                                                                                            >  2:1152148‑M2/1‑131 (MQ=255)
                     tGCTTCGCTCAGTGGAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGGTGTTTATTTTGTGCGGgctaatgactccaa                                                                                                                          <  1:300960‑M2/143‑15 (MQ=255)
                      ttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                         <  2:445539‑M1/23‑1 (MQ=255)
                      gCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTTTTTTGTGCAGggtaatgactacaac                                                                                                                         <  2:358534‑M2/143‑16 (MQ=255)
                       cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaact                                                                                                                        <  2:420168‑M2/143‑17 (MQ=255)
                             taggcgccagcgcgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATaaa                                                                                                                  >  1:582540‑M1/114‑143 (MQ=255)
                              cATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgat                                                                                                                 >  1:879188‑M2/1‑120 (MQ=255)
                               aTTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAGTTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgata                                                                                                                <  2:568328‑M2/143‑25 (MQ=255)
                                gcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAAtt                                                                                                               <  1:585450‑M1/33‑1 (MQ=255)
                                 caccaccccctcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTa                                                                                                              >  1:627395‑M1/110‑143 (MQ=255)
                                  accaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAg                                                                                                             <  2:707088‑M1/35‑1 (MQ=255)
                                   ccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGc                                                                                                            >  2:189874‑M1/108‑143 (MQ=255)
                                      taATCTCAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttt                                                                                                         >  1:1087855‑M2/1‑112 (MQ=255)
                                       cccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGa                                                                                                        <  2:114904‑M1/40‑1 (MQ=255)
                                          gtcagtagctgaacaggagggacagctgatagacacagaagccactggagcacctcaaaaacaccatcatacgctaaatcagtcagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaaa                                                                                                     >  1:703731‑M1/101‑143 (MQ=255)
                                          gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGaaaa                                                                                                     >  1:426269‑M1/101‑143 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtt                                                                                                    <  2:133346‑M2/143‑37 (MQ=255)
                                           tcAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgtg                                                                                                    <  1:886569‑M2/143‑37 (MQ=255)
                                               tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCAAGAAATGAcgc                                                                                                <  1:96579‑M1/48‑1 (MQ=255)
                                               aCTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                >  2:131075‑M2/1‑103 (MQ=255)
                                               aCTTATAGTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaga                                                                                                >  1:332649‑M2/1‑103 (MQ=255)
                                                 gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactcaatcagtaagttggcagcataaccATGTGCCGCCAAAAAATATCTTTTCATAAAATTAACCAGAAAAgacgcag                                                                                              <  2:766959‑M1/50‑3 (MQ=255)
                                                   tgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCa                                                                                            <  2:1123961‑M1/52‑1 (MQ=255)
                                                    tatTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTGTATTTTGTGCCGggtaatgactcaaactaattgatagaggctaatggtcagataatg                                                                                           <  1:456534‑M2/143‑46 (MQ=255)
                                                     aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                         <  2:389161‑M1/23‑1 (MQ=255)
                                                     aacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCttt                                                                                                                         >  1:389161‑M1/90‑112 (MQ=255)
                                                         gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                      >  2:150542‑M2/1‑93 (MQ=255)
                                                                 agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCAAGAAAAGCCGCGGCATATAGCCCTATTTa                                                                              <  1:330552‑M1/66‑1 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAACTGTCGTTATATAAAATTAGCCAGAACAGACGCGGCATATAGCCCTATTTaca                                                                            <  1:692432‑M1/68‑1 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTaca                                                                            <  2:745068‑M1/68‑1 (MQ=255)
                                                                   ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTAaca                                                                            <  1:1152468‑M1/68‑1 (MQ=255)
                                                                    tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcattaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTacac                                                                           >  1:426705‑M1/75‑143 (MQ=255)
                                                                     gAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                          <  2:178514‑M2/143‑63 (MQ=255)
                                                                      atagaaacagaagccactggagcacctcaaaaacaccatcatacactcaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTACCCAGAAAAGACGCGGCATATAGCCCTATTTACACCg                                                                         <  2:617363‑M1/71‑1 (MQ=255)
                                                                        agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                       >  2:519737‑M1/71‑143 (MQ=255)
                                                                        agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCgat                                                                       >  2:1119504‑M1/71‑143 (MQ=255)
                                                                            taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                   >  2:757063‑M2/1‑74 (MQ=255)
                                                                            taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATCTTGTGCCGggtaatgtctccaccgaattgatagtgttttatgttcagataatgcccgatgactctgtcatgcagctc                                                                   <  2:538853‑M2/143‑70 (MQ=255)
                                                                            acagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagtcggcagcatcaccTTTTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGCAAAGACGCGGCCTATATCCCTATTTACACCGCTGAtt                                                                   <  1:846037‑M1/77‑1 (MQ=255)
                                                                               gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCg                                                                >  1:390107‑M1/64‑143 (MQ=255)
                                                                                    cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCgcagca                                                           <  2:303595‑M1/85‑1 (MQ=255)
                                                                                     actggcgcaccgcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCAc                                                          >  2:548937‑M1/58‑143 (MQ=255)
                                                                                      ttAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTTTTCTTTATTTTGTGCCGggtaatgacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttt                                                         >  1:1101203‑M2/1‑64 (MQ=255)
                                                                                        aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGTCGggtaatgactccatcttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                       >  2:143885‑M2/1‑62 (MQ=255)
                                                                                           ttcgtttgtgcaATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTTTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    >  1:199748‑M2/6‑59 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    >  1:890745‑M2/1‑59 (MQ=255)
                                                                                           ttCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGATCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgactttgagaa                                                    <  1:551366‑M2/143‑85 (MQ=255)
                                                                                           gcacctcaaaaacaccatcatacactgtttttgtaatttggcagcatcaccTTGTGCTGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGaga                                                    <  1:708570‑M1/92‑2 (MQ=255)
                                                                                            tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                   >  2:772102‑M2/1‑58 (MQ=255)
                                                                                               gTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgac                                                >  2:1005540‑M2/1‑55 (MQ=255)
                                                                                                ttGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca                                               >  2:45005‑M2/1‑54 (MQ=255)
                                                                                                tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATGGAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTGaaa                                               <  2:97919‑M1/97‑1 (MQ=255)
                                                                                                   tgCAATAGCCAGGCATGTAATGAATTCAAAATTGTTCTTTCTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcg                                            >  2:675510‑M2/1‑51 (MQ=255)
                                                                                                   tgCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactacaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatccagctctaccgattttgagaacgccagcg                                            <  1:1068901‑M2/143‑93 (MQ=255)
                                                                                                     aacaccatcatacactaaatcagtaagttggcagcatcaccTTGGGCCGCCAATAAATATCTTTTCATCAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTc                                          >  2:631580‑M1/42‑143 (MQ=255)
                                                                                                       caccagcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTCTCATTAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCt                                        >  2:851075‑M1/40‑143 (MQ=255)
                                                                                                        tAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttc                                       <  1:897578‑M2/143‑98 (MQ=255)
                                                                                                          catcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCGATTTACACCGATGATTTCGCAGCAAGTGAGGTTAAAACTTCCTGAt                                     <  1:1155545‑M1/107‑1 (MQ=255)
                                                                                                           atcatacactaaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGGTAAAACTTcctgctt                                    <  1:1153890‑M1/108‑4 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    <  2:983381‑M2/126‑85 (MQ=255)
                                                                                                            cAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa                                                    >  1:983381‑M2/1‑42 (MQ=255)
                                                                                                             aGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcc                                  <  1:15354‑M2/143‑103 (MQ=255)
                                                                                                                  tGTAAGGAATTCAAAACTGATTGGTATTTTGTGCCGggaaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctgcacggattttgcgaacgcacgcgacttccgtccgcgcc                             <  1:471209‑M2/143‑108 (MQ=255)
                                                                                                                    taaatcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTcaca                           <  2:1165789‑M1/117‑1 (MQ=255)
                                                                                                                    tAAGGATTTCAAAATTGTTCTTTGTTTTGTGCCGggtaatgactccacgttgttttttgtgttttatgttcagataatgcccgatgactttgttatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                           >  1:1132085‑M2/1‑34 (MQ=255)
                                                                                                                    tAAGGAATTCAAAATTGTTCTTTATTTGGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgt                           >  2:123189‑M2/1‑34 (MQ=255)
                                                                                                                      aGGAATTTACAGTTCTTCTTTATTTTGTTGCGggtaatgcctccacctttttgttagttttttatgttcatttaatgcccgatgactttgtcatgcagctcccccgattttgagaacgacagcgacttccgtcccagccgtgc                         >  1:108475‑M2/1‑32 (MQ=255)
                                                                                                                       atcagtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGAACGTGAGGTTGAAACTTCCTGATACATGTCACAttt                        <  1:167075‑M1/120‑1 (MQ=255)
                                                                                                                           gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGGTTCATGTCaccttttctg                    <  2:645105‑M1/124‑4 (MQ=255)
                                                                                                                           gtaagttggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATCAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATg                    >  1:1007490‑M1/20‑143 (MQ=255)
                                                                                                                              aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatcttcagataatgcccgctgactttgtcatgcacctccaccgattttgagaacgacaccgccttcgctcccagccgtgccaggtcat                 <  1:723359‑M2/143‑120 (MQ=255)
                                                                                                                                 tggcagcatcaccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGgaga              >  2:809325‑M1/14‑143 (MQ=255)
                                                                                                                                      tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga         >  2:239806‑M2/1‑16 (MQ=255)
                                                                                                                                       catcaccTTGTGCCGCCAATAAAGTTCTTGGCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGCTAAAACTTCCTGATTCATGCCACATTTTATGGGGCGattaccg        <  1:710093‑M1/136‑4 (MQ=255)
                                                                                                                                         ttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattc      >  1:104192‑M2/1‑13 (MQ=255)
                                                                                                                                         tcaccTTGGGCTGCTAATAAAGATCTTTTCATAAAATTAGACAGAAAAGGCGCGGCATATAGACCTATTTACACCGATGATGTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTa      >  2:585450‑M1/6‑143 (MQ=255)
                                                                                                                                          tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca     <  2:1057537‑M2/143‑132 (MQ=255)
                                                                                                                                          tATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattca     >  2:52402‑M2/1‑12 (MQ=255)
                                                                                                                                           agtttgtGCCGggtaatggctccgacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgatttggagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag    >  1:1105991‑M2/3‑11 (MQ=255)
                                                                                                                                           aTTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcag    >  2:817753‑M2/1‑11 (MQ=255)
                                                                                                                                            ccTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGc   <  1:836728‑M1/141‑1 (MQ=255)
                                                                                                                                             gttGTGTCGGTAATAAATTTCTTTTCATTCAATTAGCCAGATAAGACGCGGCATATAGCCATATTTACATCGATGAGTTCGCAGCACGTGAGGGTAATACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCt  <  1:730986/142‑1 (MQ=255)
                                                                                                                                             cTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGAGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATCCTCGTAGgcc  <  1:338511‑M1/142‑2 (MQ=255)
                                                                                                                                              |                                                                                                                                             
GATGTTGTTCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCT  >  NC_000913/1292890‑1293173

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.