New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2017028	70 (1.040)	3 (0.050)	3/280	10.4	4.3%	coding (475/1374 nt)	fliI	flagellum‑specific ATP synthase
	?	NC_000913	= 2017106	63 (0.950)					coding (553/1374 nt)	fliI	flagellum‑specific ATP synthase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TCGGTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGT  >  NC_000913/2016888‑2017170                                                                                                                                             |                                                                                                                                               tCGGTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGCTTGAACATGTGCTg                                                                                                                                              >  1:718912/1‑143 (MQ=255)  ccgTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTgg                                                                                                                                             <  2:689170/141‑1 (MQ=255)        ggCGTTGTTAGGGCGTGTTCTGGACGGTAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCg                                                                                                                                       <  1:621708/143‑1 (MQ=255)        ggCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCg                                                                                                                                       >  2:1139425/1‑143 (MQ=255)        ggCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCACCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACCTGTGCTGGACCCCg                                                                                                                                       >  2:564523/1‑143 (MQ=255)          cGTTATTAGGTCGCGTTCTGGACGGCAGCGGTCAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGc                                                                                                                                     <  2:821374/143‑1 (MQ=255)          cGTTATTAGGTCGCGTTCGGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGc                                                                                                                                     <  2:1118264/143‑1 (MQ=255)            ttattaGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCCGGACCCCGGCgg                                                                                                                                   >  1:654784/1‑142 (MQ=255)                   gTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGCTACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCca                                                                                                                            >  2:107507/1‑143 (MQ=255)                        gTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCcaatcac                                                                                                                       >  2:179416/1‑142 (MQ=255)                         ttCTGGACGGCAGCGGTAATCCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCcaatcaat                                                                                                                      <  2:227506/143‑1 (MQ=255)                           cTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGc                                                                                                                    >  1:943056/1‑143 (MQ=255)                            tGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGAGCCCCATCAATGcc                                                                                                                   >  2:63053/1‑143 (MQ=255)                             ggACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCCATGccc                                                                                                                  >  2:825547/1‑143 (MQ=255)                              gACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCt                                                                                                                 <  2:582034/143‑1 (MQ=255)                                cGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGc                                                                                                               >  2:840729/1‑143 (MQ=255)                                       ggTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGGCACCGGCGTGGCCCCAATCAATGCCCTGCGTACCGt                                                                                                        >  2:358268/1‑143 (MQ=255)                                        gTACACCGCGCGGTGGCCTGCCCCCCCCCGACACGACGGACACCGGTGCTCTGTTCACCCCGCCCTTTTACCCGTTGCAACGTACACCTATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCATACCGtt                                                                                                       <  1:1040789/143‑1 (MQ=255)                                            aCCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAGTCAATGCCCTGCTTACCGTTGGGc                                                                                                   >  2:972015/1‑143 (MQ=255)                                             ccGCTCGATGGCCTGCCCTCCCCCTATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCg                                                                                                  <  2:422146/143‑1 (MQ=255)                                                cTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCTGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGGGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTgg                                                                                               <  1:12291/143‑1 (MQ=255)                                                cTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTgg                                                                                               <  2:679310/143‑1 (MQ=255)                                                       gCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGt                                                                                        >  2:869275/1‑143 (MQ=255)                                                        ccTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGTGCCGCGTa                                                                                       >  2:122301/1‑143 (MQ=255)                                                        ccTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACAGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTa                                                                                       >  2:130078/1‑143 (MQ=255)                                                         cTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACACCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTCCGCCCCATCAATGCCCTGCTTACCGCTGCGCGGGGGCAGCGTac                                                                                      >  2:543597/1‑142 (MQ=255)                                                           gCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCAGTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATgg                                                                                    <  2:930373/143‑1 (MQ=255)                                                             ccTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTCAACCCGTTGCAACGTACACCGATTGAACACGTGCTGGACACCGGCGTGCGCCCACTCACTGCCCTGCGTACGGCCGGCCGTGGGCAGCGCACgggg                                                                                  >  1:756776/1‑143 (MQ=255)                                                              cTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGc                                                                                 >  1:130666/1‑143 (MQ=255)                                                              cTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGc                                                                                 >  2:1159038/1‑143 (MQ=255)                                                                 ccccGATACGACGGAAACCGATACGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCCATGGGCGTGGGCAGCGGATGGGGCTGt                                                                              >  1:418779/1‑143 (MQ=255)                                                                  cccGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAg                                                                                           >  1:359395/1‑129 (MQ=255)                                                                  cccGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAg                                                                                           <  2:359395/129‑1 (MQ=255)                                                                     gATACGGGGGAAACCGGTGGGCTGATTACCCCGCCATCTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGc                                                                          <  2:464468/143‑1 (MQ=255)                                                                     gATACGACGGAAACCGGCGCGCGGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGc                                                                          <  1:63573/143‑1 (MQ=255)                                                                           acgGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCGGCGTATGGGGCGGTTTGCCGGGTc                                                                    >  1:740880/1‑143 (MQ=255)                                                                           acgGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCCGCTTGCCggggc                                                                    >  1:499707/1‑141 (MQ=255)                                                                             ggAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGGTGGACAACGGCGTGCGCCCAATCAATGCACTGCTTACGCGTGGGCGTGGGCAGCGGATGGGCCTGTTTGCCGGGtagg                                                                  >  1:301072/1‑140 (MQ=255)                                                                             ggAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCg                                                                  <  2:519350/143‑1 (MQ=255)                                                                              gAAACCGGTGCGCTGATGACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCgg                                                                 <  2:272156/143‑1 (MQ=255)                                                                                 aCCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACGCCGGCGTGCGCCCAATCACTGCCCTGCTTGCCGTTGGGCGTCGTCAGCGTATGGGACTGTTTGCCGGGTCCGGAGt                                                              >  2:192789/1‑143 (MQ=255)                                                                                  ccGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGtt                                                             <  1:1024952/143‑1 (MQ=255)                                                                                   cGGTGGGCGGATGACCCCGCCGTTTACGCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGGCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTg                                                            <  1:175978/143‑1 (MQ=255)                                                                                   cGGTGCGCTGATTACCCCGCGATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTg                                                            <  2:124230/143‑1 (MQ=255)                                                                                     gTGCGCTGGTTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCGGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGt                                                          <  2:888602/143‑1 (MQ=255)                                                                                       gcgcTGATTACCCCGCCATTTAACCCGTTGCAACCTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTaa                                                        <  2:712725/143‑1 (MQ=255)                                                                                         gcTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAAGCAATGCCCTGCTTACCGTTGGGGGTGGGCAGCGCATGGGGCCTGTTGCCGGGAGCGTCGTTgggtcac                                                      >  1:1032880/1‑138 (MQ=255)                                                                                           tgacaacgcctttaTTTACCCCGTTGCTACCTAGTGGGATTTAGCATGCGCTGGACACCGGCGTGCGCTCAATCGACGCCCTGCTTACCGTTAGGCGGGTGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAgt                                                    <  1:507107/130‑1 (MQ=255)                                                                                           gaagtacgcctgcATGTAACCCCGTGCATCGTACGCCGATTGAACATGTGCTGGACAGCGGCGTGCCCCCAAGCAATGCGCGGCTTACCGTTGGGCGTGGGCATCGTATGGGGCTGTTGGCCGGGTCCGGCGTTGGTAAAAgt                                                    <  1:123977/131‑1 (MQ=255)                                                                                             atgaCCCCGCCATGTTCCCCGTTGCACCGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTGACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAgtgt                                                  <  1:716763/140‑1 (MQ=255)                                                                                                agcccTCCACTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGtgct                                               <  2:322773/141‑1 (MQ=255)                                                                                                  cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGGCACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGtgctgc                                             <  2:705282/143‑1 (MQ=255)                                                                                                  cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGTCGTGCGCCCTATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAGAGTGtgctcc                                             >  2:711169/1‑141 (MQ=255)                                                                                                  cccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCACTGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTCGCCGGGTCCGGCGTTGGTCACAGTGtgctgc                                             >  1:378520/1‑143 (MQ=255)                                                                                                   ccGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCGGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTgctgct                                            >  1:1004852/1‑143 (MQ=255)                                                                                                         tttcgcccGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGgat                                      <  2:962136/138‑1 (MQ=255)                                                                                                           tAACCCGTTGCAACGTACACCGATTGAACATGTGCGGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGgatga                                    <  2:1116574/143‑1 (MQ=255)                                                                                                                ccttccAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCa                               <  2:256522/138‑1 (MQ=255)                                                                                                                 gTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTGAACGTGTGCTGCTGGGGATGATGGCAc                              >  2:442418/1‑143 (MQ=255)                                                                                                                  ttGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACg                             >  1:928840/1‑143 (MQ=255)                                                                                                                    gCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGtt                           <  1:1139425/143‑1 (MQ=255)                                                                                                                      aaCGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTac                         >  2:91836/1‑143 (MQ=255)                                                                                                                          tACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTAGCGTTGGGCGCGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGCGAACAGTGTGCCGAGGGGGATGATGGCAGGTTacaaca                     >  1:1058021/1‑140 (MQ=255)                                                                                                                          tACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACAccc                     >  2:1146390/1‑143 (MQ=255)                                                                                                                            cacCGCCTGAACGTGTGCTAGGCACCGGCGTGCGCCCAAGCAATGCCCTGCGTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTTGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCcgc                   <  1:542207/143‑1 (MQ=255)                                                                                                                                     caCATGGGCGGGGCGCCGGCGTGCGCCCAATCGTTTCCCTGCTTGCCGTTTTGCGTGGGCAGCGTATGGGGCTGCTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTc          <  1:286828/142‑1 (MQ=255)                                                                                                                                     aaCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTAAGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGGGCTGCTGGGGCTGATGGCACGTTACAACCGCGCCGATGTc          >  1:202286/1‑143 (MQ=255)                                                                                                                                      aCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCa         >  2:683003/1‑143 (MQ=255)                                                                                                                                      aCATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCa         <  2:653333/143‑1 (MQ=255)                                                                                                                                             cTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGt  >  2:745892/1‑143 (MQ=255)                                                                                                                                             cTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGt  <  2:573429/143‑1 (MQ=255)                                                                                                                                             |                                                                                                                                               TCGGTCCGGCGTTATTAGGTCGCGTTCTGGACGGCAGCGGTAAACCGCTCGATGGCCTGCCCTCCCCCGATACGACGGAAACCGGTGCGCTGATTACCCCGCCATTTAACCCGTTGCAACGTACACCGATTGAACATGTGCTGGACACCGGCGTGCGCCCAATCAATGCCCTGCTTACCGTTGGGCGTGGGCAGCGTATGGGGCTGTTTGCCGGGTCCGGCGTTGGTAAAAGTGTGCTGCTGGGGATGATGGCACGTTACACCCGCGCCGATGTCATTGTCGT  >  NC_000913/2016888‑2017170

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.