New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 18978831 (1.120)4 (0.150) 4/250 2.9 12.5% noncoding (77/136 nt) tff novel sRNA, function unknown
?NC_000913 = 189828 27 (1.030)noncoding (117/136 nt) tff novel sRNA, function unknown
Rejected: Frequency below/above cutoff threshold.

ACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/189669‑189788
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgtatcCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGTTGTTACACAAAGTGAGATTGTCGCTTCCGTCCAGTCTGTGTATACGAAATGGATCGGAAGTCCGGCGCGCTTTATACCACAAATACGTCGTG  <  NC_000913/189828‑189684
                                                                                                                                                                                                                                                                         
ACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCCCATATTACCGACCCCAAAGGGCACCCCG                                                                                                                      >  2:33708/1‑149
                      TATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGT                                                                                                <  1:33708/149‑1
                               TATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGGTACGTGTGTGT                                                                                              >  5:123940/1‑142
                               TATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGT                                                                                              <  6:123940/142‑1
                                                                                                                    TATCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGTTGTTCCACAAAGTGAGATTGTCGCTTCCGTCCAGTCTGTGTATACGAAATGGATCGGAAGTCCGGCGCGCTTTATACCACAAATACGTCGTG  <  4:72422/149‑1
                                                                                                                      TCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGTTGTTACACAAAGTGAGATTGTCGCTTCCGTCCAGTCTGTGTATACGAAATGGATCGGAAGTCCGGCGCGCTTTATACCACAAATACGTCGTG  <  1:50104/147‑1
                                                                                                                      TCCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGTTGTTACACAAAGTGAGATTGTCGCTTCCGTCCAGTCTGTGTATACGAAATGGATCGGAAGTCCGGCGCGCTTTATACCACAAATACGTCGTG  >  2:50104/1‑147
                                                                                                                                                                                                                                                                         
ACAATTATTGGTGTCCACGACGTATTTGTGGTATAAAGCGCGCCGGACTTCCGATCCATTTCGTATACACAGACTGGACGGAAGCGACAATCTCACTTTGTGTAACAACACACACGTATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/189669‑189788
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacgtatcCCATATTACCGACCCCAAAGGGCACCCCGGAATATGTGCCGATACGTGTGTGTTGTTACACAAAGTGAGATTGTCGCTTCCGTCCAGTCTGTGTATACGAAATGGATCGGAAGTCCGGCGCGCTTTATACCACAAATACGTCGTG  <  NC_000913/189828‑189684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.