| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 925857 = | 56 (1.230) | 3 (0.070) +ACGGGCTTTTT |
3/260 | 6.6 | 5.5% | intergenic (+317/+27) | clpA/serW | ATPase and specificity subunit of ClpA‑ClpP ATP‑dependent serine protease, chaperone activity/tRNA‑Ser |
| ? | NC_000913 | 1097195 = | NA (NA) | intergenic (+366/+370) | ycdU/serX | putative inner membrane protein/tRNA‑Ser | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTTTATTAACAACGGGCTAAACGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGG > NC_000913/925718‑925998 | cTTTATTAACAACGGGCTAAACGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACtt > 1:808701/1‑143 (MQ=255)cTTTATTAACAACGGGCTAAACGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACtt > 1:534452/1‑143 (MQ=255) caacGGGCTAAGCGTGTAGTATTTGAGTTCACTGCCGCACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAg < 1:144177/143‑1 (MQ=255) ggCTAAACGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCtctt > 1:434573/1‑143 (MQ=255) gCTAGACGTGTAGTATTTGAGTTCACTGCCGTACATGCAGCTTAGAAATTCACAGGTAACATACACCACCCGCCCACCATGTTCACTGCCGGACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCtcttc < 1:324426/143‑1 (MQ=255) aaccGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCttt < 1:685304/140‑1 (MQ=255) aaCGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAAGGCGAAAAAACAGCTCGCACTCTCGTACGAGCTcttcttaa > 2:598868/1‑141 (MQ=255) ggtgtAGTATTTGAGTCCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCCCCAGTTTCGCTGCCGTACATACAAAAAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTaaa < 1:565101/142‑1 (MQ=38) aTTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAAAGCGAAAAAAAAGCTCGCACTTACGTAAGAGCTCTTCTTGAAATATGGCgg > 2:823375/1‑143 (MQ=255) ttCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggg > 1:324588/1‑143 (MQ=255) ttCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggg > 1:352763/1‑143 (MQ=255) gcACTGCGGTACAGGCAGCTTAGAAATTCACAGGGAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAggggg < 2:407081/142‑1 (MQ=255) cACGGCCGTACAGGCAGCTGAGAAACTCACAGGTAACACACTCCACCCGCCCACCATGTTCACTGCCGGACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAgggggg < 1:207658/143‑1 (MQ=38) tGCCGTACGGGCAGGTAAGAAATTCACGGGTACCTTACCCCACCCGCCCACCATGTTCACGGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAt < 1:491667/143‑1 (MQ=25) gCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGAtt > 1:226836/1‑143 (MQ=255) tACATGCAGCCTAGAACTTCACAGGTACCCTCCTCCACCCGCCCACCCTGTTCACTGCAGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGaa < 1:435196/143‑1 (MQ=25) acgggcggcTTAGAAATTCACAGGTAACATACTCCGCCCGCCCACCGTGTGCACTGCCGTACAGACAGATAAAATGCG‑AAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAAcc < 2:274801/140‑1 (MQ=25) aGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAGATGTGGCGGTGAGGGGGGGATTCGAAccc > 1:263113/1‑143 (MQ=255) ggCAGCTCAGAAATTCACAGGTAACATACTCCCCCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCGCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGG‑‑TTCGAAtccccc < 1:541205/143‑2 (MQ=37) gCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGAT‑AAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGGATTCGAACCCCCg > 2:423074/1‑143 (MQ=255) gCAGCGTAGCAATTCACAGGTACCATGCTCCTCCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAAccccc < 1:428585/143‑1 (MQ=25) aGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGa < 1:149393/143‑1 (MQ=255) ttAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACCGATAAAATGCGAAAAAAAAGCTCGCACTGTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGAGGGGGACACGCACCCCAGATAc > 2:25128/1‑143 (MQ=37) ttAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGGGCACTACGTCAAATATGTCTGGGAGGGGGGGATTCGAACCCCCGaaca > 2:326866/1‑140 (MQ=37) gAAATTCACAGGTAACAGACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGtt < 2:749590/143‑1 (MQ=255) cacaGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATACAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAAAATGGCGGTGCGGGGGGGATAGGTACCCCCGATACGCTGCCGtc > 2:536702/1‑142 (MQ=25) caGCTAACATCCTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGtata < 2:390112/143‑1 (MQ=255) ggTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATaca < 1:793754/143‑1 (MQ=255) aaCATACTCCACCCGCCCACCCTGTTCCCTGCCGTACAGACATAGAAAATGCGAAAAAAAAGCTGGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATacacac < 2:667276/143‑1 (MQ=21) cATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACtt > 2:484053/1‑143 (MQ=255) tCCACCCGCCCACCATGTTCCCTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAg < 2:447765/143‑1 (MQ=255) tCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAg > 1:32970/1‑143 (MQ=255) aCCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCGGGCg > 1:386795/1‑143 (MQ=255) gCCCACCTTGTTGACCGCCGTGCCGACTGACACAATGCCAAAAAAAAGCTCGCACGTTCGTACGGGCTCTTCTCTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCt < 2:380719/143‑1 (MQ=14) accaTTTTCACGGCCGTACAGACAGATAAACTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTGCATTATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCtt < 2:38031/143‑1 (MQ=17) ccaTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTc > 1:706742/1‑143 (MQ=255) caTGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTGTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGCTCCGCTGCGGTATACACACTTTCCAGGCGTGCTGCTTCa > 2:11760/1‑143 (MQ=18) aTGTTCACTGCCGTACAGACAAATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAg < 2:238111/143‑1 (MQ=255) cgTTCTCTTCCGTCCAGGGAGGCAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGCTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGc < 1:637588/142‑1 (MQ=14) ttCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGCGAGGGGGGGATTCGAACCCCCGATACGGTGCCGTCTCCACACTTGCCAGGCGTGCCCCTTCAGCCa > 2:41510/1‑143 (MQ=18) aCTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACCCACTTTCCAGGCGTGCTCCTTCAGCCGCTc > 1:737266/1‑143 (MQ=255) acagacagATAAAATGCGAAAAAAATGCTCGCTCTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCt < 1:213044/143‑1 (MQ=255) acagaTAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGTGCTTCATTAAATATGGCGGCGAGGGGGGGATTCGAACCCCCGATACGTTGCCGGATCAACCCTTTCCAGGCGTCCTCCACCAGCCACCCGGacacacaacc > 2:252006/1‑137 (MQ=14) acagaTAAAATGCGAAAAAAAAGCTCGCACTTGCGTACGAGCTCTTCTTTAAATGTGGCGTTGAGGGGGGGGTTCGAACCCCCGATACGTTGCGGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCAcc > 1:177234/1‑143 (MQ=14) agagAAAAGGCGAAAAACAAGCTCGCACTTTCGTACGAGCCCTTCGTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCaa < 1:71091/143‑1 (MQ=11) aaaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTCAACGGGGAACTCCAACCCCCGATACGTTGCCGTATACACAATGTCCCGGCGTGGTGCTTGCGACCATCGGACACCTAACCAAAttc > 2:370146/1‑142 (MQ=14) aaaTGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCATTCAGCCACTCGGACACCTCACCAAATTGt > 1:585395/1‑143 (MQ=255) aTGCG‑AAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGtttt < 2:227748/143‑1 (MQ=37) gCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTg < 1:645359/143‑1 (MQ=38) gAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCGGCCACCCGGACACCTCACCAACTTGTTTTGCt > 1:255827/1‑143 (MQ=255) gAAAAAAAAGCTCGCACTTTCGTACAAGCTATTCTTTAAATAAGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACCTTCCAGGCGTGCACCTTCCGCCAACCGGACACCTCACACAATTCTTTTGCt > 2:678908/1‑143 (MQ=14) aaaaaaaGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTAc < 2:689624/143‑1 (MQ=40) tCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTTCTGCAGCCCCTCGGACACCCCACCAAATTGTTTTGCTACCAAACCTCa > 2:173269/1‑143 (MQ=255) tCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCACATTGTTTTCCTACCAAACCTCa > 2:274042/1‑143 (MQ=255) cACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATgg < 2:226836/143‑1 (MQ=255) cACTTTCGTACGAGCTCTTCTTTAAATATAGCGGTGAGGGGGGGATTCGAACCCCCGATACGCTGCCGTATCCACACTTTCCCGGCGTGCCCCCTCAGCCACCACCACACCTCACCCAATCGTTTTACCACCAACCCGCAtcc > 2:314110/1‑141 (MQ=11) | CTTTATTAACAACGGGCTAAACGTGTAGTATTTGAGTTCACTGCCGTACAGGCAGCTTAGAAATTCACAGGTAACATACTCCACCCGCCCACCATGTTCACTGCCGTACAGACAGATAAAATGCGAAAAAAAAGCTCGCACTTTCGTACGAGCTCTTCTTTAAATATGGCGGTGAGGGGGGGATTCGAACCCCCGATACGTTGCCGTATACACACTTTCCAGGCGTGCTCCTTCAGCCACTCGGACACCTCACCAAATTGTTTTGCTACCAAACCTCATGG > NC_000913/925718‑925998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |