Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	2533733	2536371	2639	29 [28]	[26] 29	ptsH–crr	ptsH,ptsI,crr

TAATGTTTAATGACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGA  >  NC_000913/2533590‑2533797                                                                                                                                               |                                                                  tAATGTTTAATGACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTCAAGTCGAACCGCCAGGCTAGACTTTAGTTCca                                                                   >  1:287106/1‑143 (MQ=255)  agtGTTTACTGATGTACGAATCGTCAGCGGTCAACACCGGCCATCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCGGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCcac                                                                  <  2:700390/141‑1 (MQ=255)      tttAATGACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTCACAATACAGGCTAAAGTCGAACCGCCAGGATAGACTTTAGTTCCacaaca                                                              >  1:908163/1‑143 (MQ=255)      tttAATGACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCacaaca                                                              >  1:212621/1‑143 (MQ=255)           tGACGTACGAAACGTCAGCCGTCAACTCCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTaaa                                                         <  2:104063/143‑1 (MQ=255)            gACGTACGTGCCGTCAGCGGTCAACACCCGTCAGCCATGGACTGTATTGCTCTCTTCGTGCGTCGCGGCTGTTCAAACCTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAAc                                                        <  2:480611/143‑1 (MQ=255)            gACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAAc                                                        <  1:571203/143‑1 (MQ=255)              cGTACGAAACGTCAGCGGTCAACCCCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCt                                                      <  1:302172/143‑1 (MQ=255)                       cGTCAGCGGGCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTgg                                             <  2:788453/143‑1 (MQ=255)                        gTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGCCTTTAGTTCCACAACACTAAACCTATAAGTTggg                                            <  2:148819/143‑1 (MQ=255)                        gTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTggg                                            <  2:619242/143‑1 (MQ=255)                        gTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAAACGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTggg                                            <  1:230429/143‑1 (MQ=255)                           aGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGaa                                         <  1:97459/143‑1 (MQ=255)                             cGGTCAACAGGCGCTAGCACGGAACTGTATGGCCCGCTTCGTGGGTCGCATCTGTTAAAAACTGGCGCTAAAAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAAt                                       <  2:1198334/143‑1 (MQ=255)                                    cacCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATCCAGGCTACAGTCGAACCGCCAGGCGAGACTTTAGTTCGACCACACCAAACCTATAAGGTGGGGCAATAccacgt                                >  2:1139417/1‑138 (MQ=255)                                        cGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAATCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCa                            <  1:257982/143‑1 (MQ=255)                                        cGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCa                            <  2:510293/143‑1 (MQ=255)                                         gCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGGCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTGTCAGTTGGGGGAATGCAATGTTCCAg                           >  1:336264/1‑143 (MQ=255)                                           cAGCAATGGACTGTATTGCGCTCTTAGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTACACAACACTAAACCTATAGGTTGGCGGCATACAATGTTCCAGCa                         >  2:1181978/1‑143 (MQ=255)                                                    aCTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAc                <  1:10707/143‑1 (MQ=255)                                                    aCTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAc                <  2:178843/143‑1 (MQ=255)                                                    aCTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAAACGCCAGTCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTAc                <  1:329295/143‑1 (MQ=255)                                                      tGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAACACCCTACGTTGCGGAAATACAATGTTCCAGCAAGAAGTTACCa              >  1:220817/1‑143 (MQ=255)                                                      tGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGACAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAAGACAATGTTCAAACAAGAAGTTACCa              >  2:819348/1‑143 (MQ=255)                                                      tGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTAGCGCTAACAATACAGCCTAAAGTCGAACCGGCAGACTGGACTTTAGATCCACAACAGTAAAACTAAAAGTTGCGGAAATACACTGTACCACAAAGCAGTTACCa              >  2:746248/1‑143 (MQ=255)                                                          ttGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGTGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACACTGTTCCAGCACGAAGTTACCAttcc          >  1:803193/1‑141 (MQ=255)                                                            gcgcTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCg        <  1:838368/143‑1 (MQ=255)                                                             cgcTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTACACCTATCAGTTGGGGAAACACAATGTTCCAGCAGGATGCTACCCTTcccac       >  1:867336/1‑141 (MQ=255)                                                                  ttCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGccattc  >  2:642939/1‑138 (MQ=255)                                                                                                                                               |                                                                  TAATGTTTAATGACGTACGAAACGTCAGCGGTCAACACCCGCCAGCAATGGACTGTATTGCGCTCTTCGTGCGTCGCGTCTGTTAAAAACTGGCGCTAACAATACAGGCTAAAGTCGAACCGCCAGGCTAGACTTTAGTTCCACAACACTAAACCTATAAGTTGGGGAAATACAATGTTCCAGCAAGAAGTTACCATTACCGCTCCGA  >  NC_000913/2533590‑2533797

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑