Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 3,992,705 IS5 (+) +4 bp coding (1553‑1556/2547 nt) cyaA → adenylate cyclase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2288919 =NA (NA)53 (1.360) 40/282 0.1 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 3992705 = 0 (0.000)coding (1553/2547 nt) cyaA adenylate cyclase
* ? NC_000913 = 2290113NA (NA)55 (1.410) 32/282 0.2 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 = 3992708 0 (0.000)coding (1556/2547 nt) cyaA adenylate cyclase

Only 100 of 108 total aligned reads displayed.

AATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTC  >  NC_000913/3992566‑3992850
                                                                                                                                              |                                                                                                                                              
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                >  1:35574‑M2/140‑143 (MQ=255)
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                <  1:492516‑M2/4‑1 (MQ=255)
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                >  2:680438‑M2/140‑143 (MQ=255)
ggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                <  2:35002‑M2/4‑1 (MQ=255)
gcataacgccgtaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTaa                                                                                                                                                <  1:530471‑M2/4‑1 (MQ=255)
aaTATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCCTGGTTTAACGGCCTGCTGACCTCGCGCCCCCGGCTGTCTCTTACAGGTAACGGCATGGTGGATTTGCGTaa                                                                                                                                                >  2:313042/1‑143 (MQ=255)
  tatTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTCACGGCATTGTCGATTTGCCTAAgg                                                                                                                                              <  1:260169‑M2/143‑3 (MQ=255)
    aacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTg                                                                                                                                            >  2:302143‑M2/136‑143 (MQ=255)
      cgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCa                                                                                                                                          <  2:444112‑M2/10‑1 (MQ=255)
       gccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGCTGCAg                                                                                                                                         >  2:216780‑M2/133‑143 (MQ=255)
       gacttaaatggtggagagacagtataaataggctgatctaaggcctttacgggagaaaaaatcggctcaaacatgacgaactgaaatgactgagtcaggcgagaggaatttccccgcttattcgcaccttccCTAAGTTGCAg                                                                                                                                         <  2:218426‑M2/11‑1 (MQ=255)
         cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTCAGTTGCAGga                                                                                                                                       >  2:566412‑M2/131‑143 (MQ=255)
         cttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGga                                                                                                                                       >  1:506028‑M2/131‑143 (MQ=255)
          ttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGgag                                                                                                                                      >  2:339394‑M2/130‑143 (MQ=255)
            atcatcAGCGATCGGCCGCTGGAATATAACCGTGACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaa                                                                                                                                    >  2:717755‑M2/1‑131 (MQ=255)
             tcatcaGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaac                                                                                                                                   <  1:263549‑M2/143‑14 (MQ=255)
              catcagccatcagcCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGCCCTCGCTCATCTGTTTGTATATTCCACGCACCGCCATTGTCGATTTGCCTCAggaaggtgcgcaca                                                                                                                                  <  1:638719‑M2/143‑15 (MQ=255)
              atggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATgg                                                                                                                                  <  2:29292‑M2/18‑1 (MQ=255)
               tggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaaaaaaatgactgcgtcagcaaagaaccagcgccccgcttattcgcaccatccCTAAGTTGCAGGAggtggt                                                                                                                                 >  1:133556‑M2/125‑143 (MQ=255)
               atcggccatcagccGCTGGAATATAACCGTTTCCTGAATAAACTGGGGGCGTGGGCATGGGTCAACGGCCTGCTGACCTCGCGCACCCGCTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaa                                                                                                                                 >  1:348594‑M2/1‑128 (MQ=255)
                ggctaataaacggtctagatgggctgattcaaaggatgtacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCGAAGTTGCAGGAGATGGTc                                                                                                                                <  1:500008‑M2/20‑1 (MQ=255)
                    ccatcagccGCTGGAATATAACCGTTACCTAAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTCTAGTACACGTACCGGCATGATCGATTTGCCTAAagaaggtgggaacaagtccc                                                                                                                            <  2:418412‑M2/143‑21 (MQ=255)
                               tGGAATATAACCGGTACCGGCAGAATCTGGTGGCGGGGGCATGGTTTAACGGCCTGCTGACCGCGCGCACCCGTTTGTATATTAAGGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagat                                                                                                                 >  2:488796‑M2/1‑112 (MQ=255)
                                      taACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                          >  1:656687‑M2/1‑105 (MQ=255)
                                      taACCGTGACCTGAGTAAACTGGGGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                          >  1:131522‑M2/1‑105 (MQ=255)
                                      taACCGCTACCTGAATACACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgttt                                                                                                          >  1:70149‑M2/1‑105 (MQ=255)
                                        tgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCg                                                                                                        <  2:32536‑M2/44‑1 (MQ=255)
                                            tcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTgc                                                                                                    >  1:516002‑M2/96‑143 (MQ=255)
                                               ccTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGTTGATCTCGCGTACCAGTTTGTATATTAAAGGTAACGGCATGGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctgg                                                                                                 >  1:19213‑M2/1‑96 (MQ=255)
                                                cTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatatgga                                                                                                <  1:56252‑M2/143‑49 (MQ=255)
                                                     ttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTg                                                                                           <  1:339394‑M2/57‑1 (MQ=255)
                                                      aaaCTGGTGGTGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccata                                                                                          >  2:598035‑M2/1‑89 (MQ=255)
                                                       aaCTGGTGGCGTGAGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatag                                                                                         >  1:673013‑M2/1‑88 (MQ=255)
                                                        cgggagaaaaaatcggctcaagcatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcac                                                                                        <  1:143263‑M2/60‑1 (MQ=255)
                                                           gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTgcaccgc                                                                                     >  1:457598‑M2/81‑142 (MQ=255)
                                                           gagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccga                                                                                     <  2:133556‑M2/63‑1 (MQ=255)
                                                             tggCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagg                                                                                   >  1:98756‑M2/1‑82 (MQ=255)
                                                               gCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggc                                                                                 <  1:604068‑M2/143‑64 (MQ=255)
                                                                cGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCCTTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggac                                                                                <  2:161849‑M2/143‑65 (MQ=255)
                                                                 agatcggctcaaacatgaagaaatgagatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                               <  2:390053‑M2/69‑1 (MQ=255)
                                                                 aaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACAATTTCCCGCTGCGCTTACCTGcaccgacaccga                                                                               >  1:627341‑M2/75‑143 (MQ=255)
                                                                    ggCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatc                                                                            >  2:60836‑M2/1‑75 (MQ=255)
                                                                        tGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaagtgcgaacaagtccctgatatgagatcatgtctgtcatctggagccatagaacagggtccatccgga                                                                        <  2:296000‑M2/143‑73 (MQ=255)
                                                                         ggTTTAACGGCCTGCTGACCTCGCGCGCCCGTTTGTATATTAAAGGTAACGGCATTGTCGAGTTGCCTAAggaaggtgcgaacaagtcactgatatgagatcatgtttgtcacctggagccatgggacagggttcgtcatgag                                                                       <  1:263081‑M2/143‑74 (MQ=255)
                                                                          gTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaagagggttcatcatgagt                                                                      <  1:15350‑M2/143‑75 (MQ=255)
                                                                           tttAACGTCCTGCTGACCGCGCGCATCCGTTTGTATAGTAAAGGTAACGGCGTAGTCGAGGGGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtc                                                                     >  1:232377‑M2/1‑68 (MQ=255)
                                                                           caacatgcagatctgaaatgactgagtcagccgagaagaatgtccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTa                                                                     <  2:572921‑M2/79‑1 (MQ=255)
                                                                            cccatgcagacatgaaatgactgagtcagccgagaagaattcccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTAc                                                                    <  2:571735‑M2/80‑1 (MQ=255)
                                                                            aacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGGCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGCAGGcgctctcc                                                                    >  2:538577‑M2/64‑141 (MQ=255)
                                                                             agatgaagaaaggaatggactgagtcagccgagaagaagttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATGTCCCTCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACa                                                                   <  2:218063‑M2/81‑1 (MQ=255)
                                                                                cGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggccggtccgaacaagtccctaatatgaaatcatgtttgtcatcaggagccatagaacagggttcatcatgagtcatcaa                                                                <  1:246582‑M2/143‑81 (MQ=255)
                                                                                 gaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGAAGATGGTCGCCAACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAgcct                                                               >  1:399721‑M2/59‑142 (MQ=255)
                                                                                  gCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatggttgtcatctggagccatagaacagggttcatcatgagtcatcaact                                                              <  2:673443‑M2/143‑83 (MQ=255)
                                                                                     aaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCgtgt                                                           <  1:302143‑M2/89‑1 (MQ=255)
                                                                                      aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGCTGGTCGCCGACGTGCCGCACCATTTCCCGCTGCGCTTACCTGCACCGACCCCGAAGGCGCCctacagccggcgcg                                                          >  2:421538‑M2/54‑137 (MQ=255)
                                                                                      aatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGtgtg                                                          <  2:506028‑M2/90‑1 (MQ=255)
                                                                                       atgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTga                                                         >  1:347997‑M2/53‑143 (MQ=255)
                                                                                         tcccttGCGCGCCGGTTTGTATCTTAAAGCTACCGGCATGGGCGATTTGCCTAAggaaggtgcgaacaagtccgtgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatctacttgccttc                                                       >  2:290821‑M2/3‑54 (MQ=255)
                                                                                         gACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATGTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttc                                                       >  1:664523‑M2/1‑54 (MQ=255)
                                                                                            cTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgcgtcatcaacctcccttcgcc                                                    <  2:679794‑M2/143‑93 (MQ=255)
                                                                                             tcactgagtcagccgagaagcatttccccgcttattcgcacctcccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCg                                                   <  1:13110‑M2/97‑1 (MQ=255)
                                                                                                       gTTCGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaatt                                         >  1:430292‑M2/1‑40 (MQ=255)
                                                                                                          tGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcctcaacttaccttcgccgacagtgaattcac                                      <  2:675725‑M2/143‑107 (MQ=255)
                                                                                                           gagaagaatttccccgcttattctccccttccCTACGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTa                                     <  2:309458‑M2/111‑1 (MQ=255)
                                                                                                              tatTAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaccttaccttcgccgccagtgaattcagcagt                                  <  2:700255‑M2/143‑111 (MQ=255)
                                                                                                                ttAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgggtaatcaactaaccttcgccgacagtgaattcagcagtaa                                <  2:693753‑M2/143‑113 (MQ=255)
                                                                                                                ttAAAGGTAACGGCATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaa                                >  1:92038‑M2/1‑31 (MQ=255)
                                                                                                                 aatttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTa                               <  1:544991‑M2/117‑1 (MQ=255)
                                                                                                                  atttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCACGTGTGAGATCCGCCATCTGGCGATTATCGTTaa                              >  1:355484‑M2/26‑143 (MQ=255)
                                                                                                                   tttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCCCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGAGAGATCCGCCATCTGGCGATTATCGttacc                             >  1:321625‑M2/25‑141 (MQ=255)
                                                                                                                    ttccccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCCTCTGGCGATTATCgttacgc                            >  1:57140‑M2/24‑140 (MQ=255)
                                                                                                                    ttccccgcttactcccacctgccCTGAGTCGCAGCAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCATCGACACCGACGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAAcc                            <  2:59502‑M2/120‑1 (MQ=255)
                                                                                                                        ccgcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGAGTATCGTGAACCTGGa                        >  1:568559‑M2/20‑143 (MQ=255)
                                                                                                                          gcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACCGCCCGTGTGAGATCCGCCATCTGACGATTATCATTCAcccggcac                      >  2:391406‑M2/18‑140 (MQ=255)
                                                                                                                          gcttattcgcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGACTCACGTTGACCTGgaac                      >  2:45308‑M2/18‑142 (MQ=255)
                                                                                                                            gCCTTGTCGATTTGCCTCTgtatgttgcgaacaagtccccgatatgagatcatgtttttcatcgggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagac                    >  2:499870‑M2/1‑19 (MQ=255)
                                                                                                                             cATTGTCGATTTGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagacc                   <  1:398051‑M2/143‑126 (MQ=255)
                                                                                                                                  gcaccttccCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGATTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATGATCGGGAACCTGGAATCTGACCCg              >  2:660657‑M2/10‑143 (MQ=255)
                                                                                                                                      ctaaagtaaggaaggtgcgaacaagcccctgatatgagatcacgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagag          >  1:610370‑M2/7‑9 (MQ=255)
                                                                                                                                       ttGCCTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagaga         <  2:194985‑M2/143‑136 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt      <  1:507309‑M2/143‑139 (MQ=255)
                                                                                                                                          ccTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattt      <  2:123315‑M2/143‑139 (MQ=255)
                                                                                                                                           cgaaggaaggtggcggcaagtccctgatatgagatcatgtttgtcatctggagccatagaacagcgttcatcatgagtcatcaacctaccttcgccgacagtgaattcagcagtacgcgccgtcagaccagaaaagagatttt     >  2:264245‑M2/3‑4 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagcaaagagatttt     <  2:652744‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagacaagctctact     <  1:357886‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatttt     >  2:326194‑M2/1‑4 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccaacagtgaattcagcagtaagcgccgtcagaccagcaaagagatttt     <  2:438930‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacgtaccttcgccgacagtgaattccgcagtaagcgccgtcagaccggaacagagatctt     <  2:537242‑M2/143‑140 (MQ=255)
                                                                                                                                           cTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAgcggcg     >  1:694544/1‑143 (MQ=255)
                                                                                                                                           cTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATCATCGTTGACCGGGAATATGCCCCGACCgcggcg     >  1:604231/1‑143 (MQ=255)
                                                                                                                                            tAAggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaagtcagcgataagcgccgtcagaccagaaaagagattttc    <  1:556529‑M2/143‑141 (MQ=255)
                                                                                                                                            tAAggaaggtgcgaacaagtccctcttatgagatcatgttcgtcatctcgggccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttc    >  1:638141‑M2/1‑3 (MQ=255)
                                                                                                                                            tAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACTCCGAAGGCGCTCTATAGAACGTGTGAGATCAGCCATCTGGCGATTATCGTTAACATGGAATATAACCCGACAGCGGCGt    >  1:16046/1‑143 (MQ=255)
                                                                                                                                             aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagcacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct   <  2:136879‑M2/143‑142 (MQ=255)
                                                                                                                                             aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttct   <  1:118672‑M2/143‑142 (MQ=255)
                                                                                                                                             aaggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaaaagggttcatcatgagtcatcaacttaccttcgccgacagtgaatgcagcagtaagcgccgtcagaccagaaaagagtttttct   <  1:93568‑M2/143‑142 (MQ=255)
                                                                                                                                              agggaggtgcggagaaggcccggataggagatcatgtttgtcctctggagccatagaagagggttcatcatgagtcatcaacttacctccgccgacagtgaattcagcagtgagcgccgtcagaccagaaaagagattttctt  >  2:165956‑M2/1‑1 (MQ=255)
                                                                                                                                              aggagggtgcgaacaagtgcctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt  >  1:59264‑M2/1‑1 (MQ=255)
                                                                                                                                              aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt  >  1:530136‑M2/1‑1 (MQ=255)
                                                                                                                                              aggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttctt  >  1:221770‑M2/1‑1 (MQ=255)
                                                                                                                                              |                                                                                                                                              
AATATTGAGTCGATCATCAGCCATCAGCCGCTGGAATATAACCGTTACCTGAATAAACTGGTGGCGTGGGCATGGTTTAACGGCCTGCTGACCTCGCGCACCCGTTTGTATATTAAAGGTAACGGCATTGTCGATTTGCCTAAGTTGCAGGAGATGGTCGCCGACGTGTCGCACCATTTCCCGCTGCGCTTACCTGCACCGACACCGAAGGCGCTCTACAGCCCGTGTGAGATCCGCCATCTGGCGATTATCGTTAACCTGGAATATGACCCGACAGCGGCGTTC  >  NC_000913/3992566‑3992850

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.