| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 3915505 = | 52 (0.950) | 5 (0.100) | 4/266 | 6.6 | 8.9% | intergenic (‑305/+48) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| ? | NC_000913 | 3915535 = | 54 (1.060) | intergenic (‑335/+18) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAG > NC_000913/3915365‑3915647 | aaTTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCaaaaaaa < 1:475894/143‑1 (MQ=255) tAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAagc < 1:914014/143‑1 (MQ=255) cTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGGTTc > 1:235701/1‑143 (MQ=255) ttAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTcc < 1:765458/143‑1 (MQ=255) ttAATTTAAGCGTCACGTGGATGTTTTTGCTCTTATTTCGATCAATGACTAAACAGGAATACAGGGCGGTTTTATATCAGCAGGCTCTATGTGAACGCTATTCAGGACGCTTCCCACGCGCAAAGCAGACCCAGCCTGTTTcc > 2:682364/1‑143 (MQ=255) ccAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCtttt < 1:248365/142‑1 (MQ=255) cAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTtg < 1:326919/143‑1 (MQ=255) gTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGc > 1:950045/1‑143 (MQ=255) gATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAACAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt > 1:592524/1‑143 (MQ=255) gATGTTTTTGCTCTTATGTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCttt < 1:184013/143‑1 (MQ=255) tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 1:305882/1‑143 (MQ=255) tGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTc > 1:535552/1‑143 (MQ=255) gCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTCTCCAGACTGGCTTTTGTGCTTTTCAAGCCgg < 1:964230/143‑1 (MQ=255) tcgttATTTCGAGCAAGGAATAAACAGGAAAACATGAGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGTGACACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGgt < 2:357573/140‑1 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGgtg > 1:249961/1‑143 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACCGGCTTCTTTTTTTTTCAAGCCAgtg > 1:930478/1‑143 (MQ=255) tctTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAAAGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCGATTGCACTGTTCAAGCCAgtg > 2:654501/1‑143 (MQ=255) ttATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGtt < 1:911624/143‑1 (MQ=255) tCGATCAATGAATAAAAAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATc < 1:931225/143‑1 (MQ=255) tCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCtt > 1:803180/1‑143 (MQ=255) aaTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGAGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCCGACTGGCTTTTGTGCTTTTCAGGCCGGTGTCACATCGCtttt > 1:119128/1‑143 (MQ=255) aTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACGCGCGCAAGAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCGTTTCCAGCCGGTGTTACCTCGcttctt > 2:747045/1‑143 (MQ=255) aTGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCttttt > 1:556994/1‑143 (MQ=255) gAATAAACAGGAAAACAGGTGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTg < 1:610560/143‑1 (MQ=255) aaCAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGGATGGTTGCGGAGCGTGTCAAGCCGGGGTTACATCGCTTTTTTGGTcca > 1:221937/1‑141 (MQ=255) aaCAGGAAAACAGGGGGGGTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGACTTGTGAACTTATCAAGCCGGAGTTACATCGCTTGTTTGGTGaa > 2:856000/1‑143 (MQ=255) ggAAAATAGAGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCg < 2:337396/143‑1 (MQ=255) aagaGGGGTGTTGTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATaa < 1:160849/140‑1 (MQ=255) aaCAGGGGGTTTTTAGATGAGCAGGCTCTATGTGAACGCTATTCAGGACGGTTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATaa < 2:166586/143‑1 (MQ=255) aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACACCGCTTTTTTGGTCAACTCGATCAcgc > 1:104347/1‑143 (MQ=255) aGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTCTTGTGATTTTCAAGCCGGTGTTGCATCGCTTTTGTGGGCCACTGGGTCAcgc > 1:203335/1‑143 (MQ=255) gggTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACTCGCAg > 1:612722/1‑143 (MQ=255) ttttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTg > 2:842743/1‑143 (MQ=255) tttATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGCTCACACGCGCAAAAAAAAGCCAGCCTGTTCCCACACTGGCTTTCGCGCTTCTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGCTAACGCGCAGCTgc < 1:525562/143‑1 (MQ=255) agcagGGTCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCTCGATCGc > 2:152946/1‑143 (MQ=255) cagTATCTATGTGAACGATATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCtt < 1:384163/143‑1 (MQ=255) cagGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACATCGCCTTTTTTGGCCACTCGATAACGCGCAGCCGCGCCATCGcct > 2:59596/1‑141 (MQ=255) atgATCTATGTGACCGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCttt < 2:289485/141‑1 (MQ=255) tATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTTCGCGATCGCTTTGGCCAg > 1:967377/1‑143 (MQ=255) tgtgAACGCTATTCAGGATGTGTTACACGGGTAAAAAAAAGCCAGCCTGTTTACAGACTGGCGTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGtt < 1:498190/143‑1 (MQ=255) ccGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATCACGAGCAGCTGCTCGATCGCTTTGGCCAGTTCCGCa < 1:732605/142‑1 (MQ=255) gcgggACGGGGCGCACGCGGAAAAAAAAGCCAGGCTGTTTCCAGACGGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCt < 1:682364/140‑1 (MQ=255) taCGGGTCACATGCGCAAAGAAAAGCCAGCCTGTTTCCAGACTGGTTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGc < 2:307314/142‑1 (MQ=255) gACGGGTCACACGCGCAAGAAAAAGCCAGCCGGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGAGCGCTGTGGCCAGTTCCGCCGGCGCCTGGGc > 2:603678/1‑143 (MQ=255) gtgTCACGCGCGCAAATAGAGGCCGGCGTGTTGCTAGACTCGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGGTTTTTTGGTCAACTCGATACCGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTa < 2:71201/141‑1 (MQ=255) ggTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTaa < 2:556994/143‑1 (MQ=255) ctCACACGCGCATAATGGAGCCAGCCTGTTTCCAGACTGGCTGTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCACCTCGAGATCGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAAt < 2:5738/142‑1 (MQ=255) gcgcgggcAAAAAAAAGACAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTGTGGTCAACTCGATAACGCGTGTTTTCTGGATCACTATGGCCAGTTCCGCAGACGCCTGAGCGTAATCTa < 2:212340/137‑1 (MQ=255) gcgcAAAAAAAAGCCAGCCTGTTTCCAGCCTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACCCGCAGCTGCGCGATCGCTTTGTCGAGGTCCGCAGACGCCCGAGCCTAGTCTACgcc > 1:934890/1‑141 (MQ=255) gcgcAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGCGCGTACTCTACggc > 1:441940/1‑141 (MQ=255) aacaaaaGCCGGCCTGCTGACGGACCGGCGTGTGGGCGTGTCAAGCCGGTGTGACATCGCTTTTTTGGTCAACTCGATCACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCgc < 1:926906/140‑2 (MQ=255) aaaaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGt > 1:603955/1‑143 (MQ=255) aaaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTga < 1:693539/143‑1 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTgag > 2:42355/1‑143 (MQ=255) aaaaGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGGGTTACATCGCTTTTTTGGTCAAATCGATAACGCGCAGCTGCGCGATCGCTTTGGCCGGTTCCGCAGACGCCCGAGCGTGATCTACGTCGCCggcgg > 1:401367/1‑139 (MQ=255) | AATTAAGGCAGTACCTTAATTTAAGCGTCAGGTGGATGTTTTTGCTCTTATTTCGATCAATGAATAAACAGGAAAACAGGGGGGTTTTATATCAGCAGGATCTATGTGAACGCTATTCAGGACGGGTCACACGCGCAAAAAAAAGCCAGCCTGTTTCCAGACTGGCTTTTGTGCTTTTCAAGCCGGTGTTACATCGCTTTTTTGGTCAACTCGATAACGCGCAGCTGCGCGATCGCTTTGGCCAGTTCCGCAGACGCCTGAGCGTAATCTACGTCGCCGTGAG > NC_000913/3915365‑3915647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |