| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,979,486 | IS5 (+) +4 bp | intergenic (‑271/‑264) | insA ← / → uspC | IS1 repressor TnpA/universal stress protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1979486 = | 0 (0.000) | 112 (1.540) | 70/282 | 0.0 | 100% | intergenic (‑271/‑267) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
| * | ? | NC_000913 | = 1979489 | 0 (0.000) | 99 (1.360) | 57/282 | 0.2 | 100% | intergenic (‑274/‑264) | insA/uspC | IS1 repressor TnpA/universal stress protein |
| ? | NC_000913 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCC > NC_000913/2289972‑2290252 | aaGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTGCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCa > 2:712143/1‑143 (MQ=11) aGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGCCTTGTTCGCACCTTCCAt > 2:55343/1‑143 (MQ=14) aaacTCCCTTTGCTCGCCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATaa < 1:1167732/143‑1 (MQ=11) gctctTTTCTGGTCTGACGGCGCTTACTGCTGAATGCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTGCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCt < 2:599784/142‑1 (MQ=255) ctctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTg < 2:296603/143‑1 (MQ=35) ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑Ta > 1:39825/1‑143 (MQ=38) ttttCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACGAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAg > 1:471124/1‑143 (MQ=38) tGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTCAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGccacc > 1:1290298/1‑143 (MQ=255) cTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGaa < 2:570691/143‑1 (MQ=255) cTGACGACGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATCGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGaa < 2:679048/143‑1 (MQ=255) aCGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCAGAACGCTG‑TAGCAACGAGAACAg > 1:847922/1‑143 (MQ=255) ccttttgtgctaAATTCAGTGTCCGCGAAGGCAAGTGGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCACGGACTTGTGCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGatat < 2:1307346/136‑1 (MQ=17) gttAGTGCTGAGTTCACTGGCGGTGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTg < 2:1051579/142‑1 (MQ=255) ttACTGCTTAAGTCACTGTCGGCGACGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGc < 2:1031746/143‑1 (MQ=255) ttACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGc < 2:485416/143‑1 (MQ=255) tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCggca > 1:920372/1‑141 (MQ=255) tgctgAACTCACTGTCGGCGAAGGTAAGTTGATGACTCATCACGAACCCTGTTCTATGGCCCCAGATGACAAACATGCTCTCATATCATGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGaa < 1:1143548/143‑1 (MQ=18) ctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATACCGCTG‑TAGCACCCAGAACAGCTATTGCGGAACg > 2:179338/1‑143 (MQ=255) aaTTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGccacca > 2:557123/1‑121 (MQ=255) aaTTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGccacca < 1:557123/121‑1 (MQ=255) aaTTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCAACCAGAACAGATATTGAGCAACGACa > 2:605494/1‑143 (MQ=255) aCTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCCAAACAGACATCACGGAACGACACagaa > 2:746182/1‑142 (MQ=17) tGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTA‑TAGCCACCAGAACAGATATTGCGGCACGACAAAGAGaa > 2:311590/1‑143 (MQ=255) gTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa < 1:1059926/143‑1 (MQ=255) gTCCGCGAAGGGAAGTTGATGACCCAGGATGCCCCCTCTTCGATGGCTCCAGATGACAAACATGATCTCATAGCAGGGACTTGTTCGCACCTCCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGaaa < 1:776858/143‑1 (MQ=21) tCGGTGAAGGTAATTTGATGACTAATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACATTCCATAACGCTG‑TAGCAACCAGAACAGATATTGCGGAACGACAAAGAGAAAc < 2:1239133/143‑1 (MQ=21) cGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGaa > 1:925025/1‑143 (MQ=255) aaGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAAcc < 2:39825/143‑1 (MQ=255) ggTAAGTTGATGACTCATGATGTACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAg < 2:206730/143‑1 (MQ=255) gTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGa < 1:786979/143‑1 (MQ=255) aaGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGAtt < 1:349717/143‑1 (MQ=255) aGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATAACAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGCACAGATATTACGGAACGACAAAGAGAAACAGAACAAGAATg > 2:708552/1‑143 (MQ=21) tgatgaCTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATg > 1:1072123/1‑143 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCGCCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAg > 1:1084773/1‑143 (MQ=255) tCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATGGATGCATTGAg > 1:70297/1‑143 (MQ=255) ccccGTTCTATGGCTCCAGATGACAAACATGATCTCATAGCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATAGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCt < 1:1112221/143‑1 (MQ=255) cccTGTTCTATGGCTTCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCt < 1:869254/143‑1 (MQ=255) ccTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTa > 1:787944/1‑143 (MQ=255) cggTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTGCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTAt < 1:1003673/141‑1 (MQ=255) aTGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta > 2:299615/1‑143 (MQ=255) aTGGCTCCAGAGGCCAAACATGAGCTCATATCAGGGACTTGTGCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAaatta < 2:623024/143‑1 (MQ=255) tCCAGATGACAAACATGATCTCATATCAGGGACTTTTTCGCACCTTCGATAACGCTG‑TAGCCACACGAACCGATATTGCGGAACGACATAGAGACCCAGAACCATATTGATGCCTTGTGCTTTCATCCTATGCAATTAATTGc > 2:660943/1‑143 (MQ=25) tCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGc < 1:450420/143‑1 (MQ=255) ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCt < 1:424565/143‑1 (MQ=255) aGATGACAAACATGATCTCATATCAGAGACTTGTCCTCACCTGTTATAATGCGC‑TAGCCACCAGAACAGATATTACGTAACTACAAAGAGAAACATAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCGGt > 2:873583/1‑143 (MQ=255) aCAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGCAATTAATTACTGTTaaag > 2:382082/1‑142 (MQ=255) cAAACATGATCTCATAGCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAg < 2:624688/143‑1 (MQ=255) aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAt < 2:532508/143‑1 (MQ=255) aCATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACAAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGAATGATGAATTGAGCTTTCATCCTATAAAATTAATTCGTGTTAAAAGCAt > 2:1267909/1‑143 (MQ=39) aTGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTg > 2:718098/1‑143 (MQ=255) tGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg < 2:1184707/143‑1 (MQ=255) tGATCTCATATCAGGGACTTGTTCGCACCCTCCGCAA‑GCAGTTAGCCACCAGAACAGATATTGCGGAACGACAAAGGGAAACTCAACCAGATTGATGCGTTGAGGTTTCAGCCGATGGAATTAATTGCTGTTAAAAGCAttag > 2:466936/1‑141 (MQ=255) cgctcccATATCATCGACTTGTTCGCACCTTCCATCACGCTG‑TACCCACCAGAACATCTATTGCGGAACGACAAAGAGAACCAGAACCCGATTGATGCATCGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTgg < 1:256194/137‑1 (MQ=255) tctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCCCCAGAACAGATATTGCGGAACGCCACAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATACTATGAAATTAATTGCTATTAAAAGCATTTGGtt > 2:556117/1‑142 (MQ=255) tctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa > 1:345593/1‑143 (MQ=255) tctcAGTTCAGGGTGGTGTTCGCGGCTTCTATAACGCTG‑TCCCTCACAGAACAGATGTTGCGGAACGACAAAGAGAAACAGAACCAGATTGATTCATTGCGGTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTa < 2:391419/143‑1 (MQ=255) ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc > 1:133241/1‑143 (MQ=255) ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTCTCATCATATGAAATGAATTCATGTTAAAAGCATTGGGTAc > 2:925371/1‑143 (MQ=255) ctcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAACCACCAGCACAGATATTGTGGAACGACAAAGAAAAAAAGAAACAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTAc > 1:56131/1‑143 (MQ=255) tcatgacAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa < 1:15124/137‑1 (MQ=255) tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa > 2:128355/1‑143 (MQ=255) tcATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACa > 1:230700/1‑143 (MQ=255) ccAGGGACTTGTTCGGACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAACGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGaaaa < 2:403410/142‑1 (MQ=255) aGGGACTTGTTCGCACCTTCCATCACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATCGCTGTTAAAAGCATTGGGTACAGAAAATa < 2:727521/143‑1 (MQ=255) aGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGGAAATa > 1:453116/1‑143 (MQ=255) aGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATa > 2:314967/1‑143 (MQ=255) ggACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc > 1:384900/1‑143 (MQ=255) cgACTTGTTCCCACCTGGCATAACGCTG‑TAGCCACCAGAACAGTTATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATAcc < 2:920372/142‑1 (MQ=255) ttGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGCTGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATa > 1:634611/1‑143 (MQ=255) tCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc > 1:1042066/1‑143 (MQ=255) tCGCACCTCCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGAGGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTc < 1:648710/143‑1 (MQ=255) gCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCa > 1:975068/1‑143 (MQ=255) ttCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCCTAGCTCCATAccc > 1:278183/1‑143 (MQ=255) taccATAACGCTG‑TAGCCCCGAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACTAGACTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATAccc < 1:336163/141‑1 (MQ=255) | AAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCATAACGCTG‑TAGCCACCAGAACAGATATTGCGGAACGACAAAGAGAAACAGAACCAGATTGATGCATTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAGAAAATACCCATAGCTCCATACCC > NC_000913/2289972‑2290252 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |