Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	1293040	1303475	10436	57 [0]	[0] 50	tdk–[oppB]	tdk,insZ,insZ,insZ,adhE,ychE,oppA,[oppB]

TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292898‑1293180                                                                                                                                              |                                                                                                                                              tCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGg                                                                                                                                              >  2:908868‑M2/1‑142 (MQ=255)  cAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGgg                                                                                                                                             <  1:497342‑M2/143‑3 (MQ=255)    gAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCAAGGAAGGTAAGGAATTAAAAATTGTTCTTTATTTTGTGCCGggta                                                                                                                                           <  1:848912‑M2/143‑5 (MQ=255)    gAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACCTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCAAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggta                                                                                                                                           <  2:492557‑M2/143‑5 (MQ=255)        tttAGGGGCTTCGCTCATGGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatga                                                                                                                                       >  2:248534‑M2/1‑135 (MQ=255)              tGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaa                                                                                                                                 >  2:343878‑M2/1‑129 (MQ=255)               gCTTCGCTCATTGTAGTAATCTCAAACTTAGATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaac                                                                                                                                >  1:61324‑M2/1‑128 (MQ=255)                cTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCGAGAGCCAGGAATGTAAGGAATTCTAAATTGTTCTTTATTTTGTGCCGagaaatgactacaact                                                                                                                               <  1:177796‑M2/143‑17 (MQ=255)                 ttCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTAAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaactt                                                                                                                              <  1:15658‑M2/143‑18 (MQ=255)                   cGCTCATTGTAGTACTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTCATACTTGCGCCTCGTATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                            >  2:826685‑M2/1‑124 (MQ=255)                   cGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                            <  1:828758‑M2/143‑20 (MQ=255)                   cGCTCATTGTAGTAATCTAAAACTTATATTGGGGTCGATTGTAGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttat                                                                                                                            >  1:79776‑M2/1‑124 (MQ=255)                   cGCTCATGGTAGTAATCTCAAACTTATAGTGGGGTGGTTTGGTGAGGTAAGAATAGAGCCTTACATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTCCCGggtaatgactccaacttat                                                                                                                            >  2:342550‑M2/1‑124 (MQ=255)                      tCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattga                                                                                                                         >  1:147958‑M2/1‑121 (MQ=255)                             agtaATCTTAAACTTGTATTGGGGGGGTTTGGTGAAGTAATAATAGAGACTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtt                                                                                                                  >  2:925527‑M2/1‑114 (MQ=255)                               taATCTCAAACTTATATTGGGGTTGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttt                                                                                                                >  2:691155‑M2/1‑112 (MQ=255)                               taATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaaggactccaacttattgatagtgtttt                                                                                                                <  2:182216‑M2/143‑32 (MQ=255)                               taATCTCAAACTTATATTGGGGTGGTGTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGACGTGAATTTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttt                                                                                                                >  2:114365‑M2/1‑112 (MQ=255)                                aaTCTCAAACGTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgtttta                                                                                                               >  2:151123‑M2/1‑111 (MQ=255)                                 aTCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttat                                                                                                              >  1:202155‑M2/1‑110 (MQ=255)                                       aaCTTATATTGGGGTGGTTTGTTGAGGTCATAATTTAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTTTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcag                                                                                                        >  2:195278‑M2/1‑104 (MQ=255)                                         cTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagat                                                                                                      >  1:308974‑M2/1‑102 (MQ=255)                                                tGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATCCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgccc                                                                                               >  1:408568‑M2/1‑95 (MQ=255)                                                  gggTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccga                                                                                             >  1:15789‑M2/1‑93 (MQ=255)                                                   ggtggtTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgat                                                                                            <  1:760058‑M2/143‑52 (MQ=255)                                                       gcttgtttggGTAATAATAGACCCTTATATTCAGTGGTGCAATAGCAAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTTTGCCGggtaatgactccaccttattgatagtgttttatgttcagataatgcccgatgact                                                                                        >  2:353008‑M2/3‑88 (MQ=255)                                                         ttgttgAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgacttt                                                                                      <  1:425267‑M2/143‑58 (MQ=255)                                                              gATGTAATAATAGAGCCTGAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat                                                                                 >  1:937696‑M2/1‑81 (MQ=255)                                                               tggtAATAATAGATCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatggtgttttatgttcagataatgcccgatgactttgtcatg                                                                                >  2:947523‑M2/2‑80 (MQ=255)                                                                   aataagAGAGCTATAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagc                                                                            >  1:41031‑M2/1‑76 (MQ=255)                                                                    ataataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatggcttgcagaaattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagct                                                                           <  1:694320‑M2/143‑69 (MQ=255)                                                                     taataGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                          >  1:544866‑M2/1‑74 (MQ=255)                                                                     taagaGAGCCTTAAATTCAGGTGTGCAATAGCCAGGAGTTTAAGGACACCACCGGGTTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctc                                                                          >  1:945134‑M2/1‑74 (MQ=255)                                                                                 aaaTTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTTTTCTTTATTTAGAAAGAtagaaggacgccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttga                                                              >  1:849768‑M2/1‑62 (MQ=255)                                                                                     tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgtcttcaacttattgatagtgttttatgtgcagagaatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                          >  1:328955‑M2/1‑58 (MQ=255)                                                                                     tCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAAGTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaac                                                          >  1:498142‑M2/1‑58 (MQ=255)                                                                                              cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgccgctccaccgattttgagaccgacagcgac                                                 <  1:208539‑M2/143‑95 (MQ=255)                                                                                              cAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgac                                                 >  2:848912‑M2/1‑49 (MQ=255)                                                                                                  aGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttcc                                             >  1:491450‑M2/1‑45 (MQ=255)                                                                                                        gAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttctgttcagataatgcccgatgcctttgtcgtgcggcccccccgattttgagagcgacagcgacttccctccca                                       <  2:419240‑M2/143‑105 (MQ=255)                                                                                                             tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagcacgacagcgacttccgtcccagccgt                                  <  1:188203‑M2/143‑110 (MQ=255)                                                                                                             tAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactcaaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacgtccgtcccagccga                                  <  2:734060‑M2/143‑110 (MQ=255)                                                                                                               aGGAATTCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagccactcccgtcccaaccctgc                                <  2:632242‑M2/143‑112 (MQ=255)                                                                                                                    ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccgacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggt                           >  1:564901‑M2/1‑27 (MQ=255)                                                                                                                    ttCAAAATTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcaggtaatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgcaaggt                           <  1:310476‑M2/143‑117 (MQ=255)                                                                                                                       aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgct                        <  2:455216‑M2/143‑120 (MQ=255)                                                                                                                       aaaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttaatgatagtgttttatgttcagataatgcccgatgactttgacatgcagctccaccgattttgagcacgacagcgacttccgacccagcagtgccaggtgcc                        <  2:857449‑M2/143‑120 (MQ=255)                                                                                                                        aaaTTGTTCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggggctg                       <  2:120714‑M2/143‑121 (MQ=255)                                                                                                                         tatTGTTCTTTCTTTTGTGCCGggtaatgactccttcttattgatagtgttttatgttcagatgatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgc                      >  2:669307‑M2/2‑22 (MQ=255)                                                                                                                            tGTTCTTTATTGTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctc                   >  1:757342‑M2/1‑19 (MQ=255)                                                                                                                              ttCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcag                 <  2:553586‑M2/143‑127 (MQ=255)                                                                                                                               tCTTTATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcaga                >  1:901262‑M2/1‑16 (MQ=255)                                                                                                                                 tttATTTTGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagatt              <  1:582423‑M2/143‑130 (MQ=255)                                                                                                                                    aTGTTGTGCCGggtaatgactccaacttattgatagtgtcttatgttcagataatgcccgatgactttgtcatgcagctccaccgatcttgagaacgacagcgacttccgtcccagtcgtgccaggtgctgcctcagattcag           >  2:909839‑M2/1‑11 (MQ=255)                                                                                                                                      tttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggt         >  2:6317‑M2/1‑9 (MQ=255)                                                                                                                                       ttGTGCCGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgcggcctccgattcaggtt        <  2:311594‑M2/143‑136 (MQ=255)                                                                                                                                             cGggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgacagcgacttccgtcccagccgtgccaggtgctgcctcagattcaggttatgccg  <  2:558393‑M2/143‑142 (MQ=255)                                                                                                                                              |                                                                                                                                              TCAGAATTTTAAGTGCTTCGCTCATTGTAGTAATCTCAAACTTATATTGGGGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACC  >  NC_000913/1292898‑1293180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑