New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 2727889 = | NA (NA) | 6 (0.100) | 5/270 | 7.8 | NA | noncoding (1294/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon |
? | NC_000913 | 2727908 = | NA (NA) | noncoding (1275/2904 nt) | rrlG | 23S ribosomal RNA of rrnG operon | |||||
Rejected: Coverage evenness skew score above cutoff. |
ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2728036‑2727889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGT > NC_000913/2727908‑2728049 ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTCACGATAAAGCGGGGGAAGAGC > 1:442777/1‑143 tgctcggaggcgGCGGCGGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCGGTAAGCCTGCGAAGGTGGGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCC < 1:559304/131‑1 TGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTGCTGTAAGCCTGCGGAGGTGTGCGGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCC < 2:960672/143‑1 GCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGCAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCC > 2:627499/1‑143 GCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATGAGTAACGATAAAGCGGGTGAAAAGCac > 2:998503/1‑141 cgCCGATGCTGTGGCGTTGACGCTTATGCGTTGTCTGGTAGTGGAGCGTTCTGTGAGCCTGCGAAGGTGTTCTGTGAGGCATGCTGGAGGTATCAGAATTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCG < 1:747534/141‑1 ACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGCAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGC > 2:216256/1‑143 ACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGAGAAAAGCCCGC > 2:31186/1‑143 cgGAAGGTGGGGCAGCGCCGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCGTGGAAGGTGTGCTGTGAGGCCTGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT < 2:75552/141‑1 CCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT > 2:300977/1‑143 CCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCGGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT > 1:507928/1‑143 CCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGCAGAGGAGCGTTCCGTCAGCCGGCGAAGGAGTGCTCTGAGGCATGATGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAGAGCGGGCGAAAAGCCCGCT > 1:147245/1‑143 TGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACATATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCCGGCTTACAGCACGCCCCCCTACCCCACACCGCATAAGCG > 1:697797/1‑143 GATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGGTACCTCGAGCATGCCTCACAGCACACCTTCGCAGGCTTACCGAACGCTGCCCCACCCAACACCGCATAAGCGTCGCGGCCGCAcc > 1:160903/1‑141 GATAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAac > 2:137794/1‑141 TAAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCACTGGCTTACAGAACGAAACACAACCAAACAACGCATAAACGACGCTGCCGCAACTa > 2:73349/1‑142 AAAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGAACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGATTACAGAACACTCCCCTAGCCAACAACGCATACGCGTCACTGCCGCAGCTag > 1:324127/1‑141 AAGCGGGTGAAAAGCCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCG > 2:67221/1‑143 ctagtccCCCGCTTTACCGTCACTTATGTCACCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGCCGCTGCCGCAGCTTCGGTGCATG < 2:29452/136‑1 ccCCCGCTTCATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTA < 2:25704/141‑1 CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGC > 2:188156/1‑143 CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGC < 2:809491/143‑1 CCCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCCCCAGCATGCCTCACAGCACACCTCCGCAGGCTTACACAACGCCCCCCTCCCCAACCACGCCTCAGCGCCGCCGCCGCCGCTTCGGCACATGGTCTAGC > 1:803499/1‑143 CCCGCTTTATCGTTACTTATGCCAGCATTCGCACTTCTGATACCTCCAGCCTGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCTGTGCATGGTTTAGC < 1:531972/143‑1 CCCGCTGTATCGTTACTGATGTCCGCAGTCGCGCTTCTTATACGTCCTGCCTGCCTCACAGCATACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGTCGCAGCTTCGGTGCATGGTTTAGC < 1:223150/143‑1 CCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTCCGGTGCATGGTTTAGCC > 2:904054/1‑143 CCGCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATACCTCACAGCACACCCTCGCCGGCTTACAGAACGCTCCCCTACCCACCCACGCATAAGCGTCGCCGCCGCAGCTTCGGTGCATGCCTTAGCC > 1:481831/1‑143 GCTTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCAAGCCTCACAGCACACCTTCGCAGGCTTACAGACCGCTCCCCTACCCAACGACGCCTAAGCATCGCTGCCGCAGCTTCGCTGCACGGTaacgaccc > 1:86137/1‑135 TTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCGTCGGTGCATGGTTTAGCCCCGT > 2:650535/1‑143 TTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTCACAGAACGCTCCCCTACCCACCAACGCATCAGCGTCGCTGCCGCACCTCCGGTGCACGGTCTAACCCCGT > 1:923925/1‑143 ATGCACCGAAGCTGCGGCAGCGACGCTTATGCGTTGTTGGGTAGGGGAGCGTTCTGTAAGCCTGCGAAGGTGTGCTGTGAGGCATGCTGGAGGTATCAGAAGTGCGAATGCTGACATAAGTAACGATAAAGCGGGTGAAAAGCCCGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2728036‑2727889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cccgctTTATCGTTACTTATGTCAGCATTCGCACTTCTGATACCTCCAGCATGCCTCACAGCACACCTTCGCAGGCTTACAGAACGCTCCCCTACCCAACAACGCATAAGCGTCGCTGCCGCAGCTTCGGTGCATGGTTTAGCCCCGT > NC_000913/2727908‑2728049 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |