New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3679526 =	46 (0.760)	5 (0.080)	5/274	7.9	9.9%	coding (109/930 nt)	kdgK	2‑dehydro‑3‑deoxygluconokinase
	?	NC_000913	3679544 =	46 (0.780)					coding (127/930 nt)	kdgK	2‑dehydro‑3‑deoxygluconokinase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC  >  NC_000913/3679403‑3679684                                                                                                                                              |                                                                                                                                             aTCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCCATAACGCCCGACAAGACGATca                                                                                                                                             >  1:1009560/1‑142 (MQ=255) aTCAGGTGTCCGTCTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGCTTCAGCTTTCCGATAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATcc                                                                                                                                             <  2:29249/143‑1 (MQ=255)       ttCACGACTAGGTCAAAAAACCGTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGc                                                                                                                                       <  1:924477/143‑1 (MQ=255)        tCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCa                                                                                                                                      <  1:954882/143‑1 (MQ=255)        tCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCa                                                                                                                                      >  2:513035/1‑143 (MQ=255)          aCGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCAtt                                                                                                                                    >  2:70205/1‑143 (MQ=255)             aCTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGACCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAAc                                                                                                                                 <  2:405067/143‑1 (MQ=255)                aTGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGt                                                                                                                              <  2:179338/143‑1 (MQ=255)                   tCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGGCGTTAAGCGCGGTTTCGGCGGCGATACCCTGAGCACTCCCGGCGATACCCCCCGGCAGGCCGCACCAGGCGCAGTCACCGTTCa                                                                                                                           >  1:899077/1‑143 (MQ=255)                   gccAAAAAGGTTGCCGTGATTGGCGCAGGCATGATTGAGCTTTCCGAGAGAGGCGCGGACGTTAAGCGAGCGTTCGGCGGCGATACCCTGAACCCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCa                                                                                                                           <  1:576827/142‑1 (MQ=255)                   gccAAAAAGATTGCCGGGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCa                                                                                                                           <  2:928357/142‑1 (MQ=255)                     cAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAACGCGATTTGGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCAtt                                                                                                                         >  2:668606/1‑143 (MQ=255)                      aataagtgtGCCGTGATTGGCGCGTGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTa                                                                                                                        <  1:736119/135‑1 (MQ=255)                      aaaaaGATTGCCGTGATTGGCTGACGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTa                                                                                                                        <  2:714608/143‑1 (MQ=255)                       aaaaGATTGCCGTGATTGGCGAATGCTTTATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTGTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTAc                                                                                                                       <  2:872370/143‑1 (MQ=255)                                 cGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATGGCCCGTCAGGTCGATCCTGCGGCGTTACCCGGTGATTACGTGACGgcgc                                                                                                             >  2:78077/1‑143 (MQ=255)                                   tGATTGGTGAATGCATGGTTGGGCTTTCCGAGGATTGCGGGGACGTGAAGCGCGGTTTCGGCGGCGATACCCTGAACGCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTg                                                                                                           <  1:65787/143‑1 (MQ=255)                                   ggagtGGCGAATGCATGAGGGAGCTGTCCGGGAAGGGCGCGGACGTTAAGCGCGGTGTCGGCGGCGATACCCGGAACGCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTg                                                                                                           <  1:245547/139‑1 (MQ=255)                                       tGGGGAATGCAGGATTGAGGTTCCCGAGAAAGGCGCGGGTGTTAAGGGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGaa                                                                                                       <  2:225043/143‑1 (MQ=255)                                           gAATGCATGATGGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGa                                                                                                   <  2:968433/143‑1 (MQ=255)                                            caTGCCTGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGAc                                                                                                  <  2:904785/142‑1 (MQ=255)                                                    aTTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCGTTACGTAACGCGGCCGGGAACGGACAGATTTAg                                                                                          >  2:11838/1‑143 (MQ=255)                                                     ttGAGGTTTGCGCGAACTGCGCGGACGTTAAGCGCGGTTTCGCCGGCGATACCCTGAACACTCCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTACCCGTTCATTTCATAACGGCGCTGGGAACGGACAGTTTTAGc                                                                                         <  1:871673/143‑1 (MQ=255)                                                            ttCCGGGTATGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGCTCCCCTGATCTCTTCCTTCTATATCGCCCGTCAGGGCGATCCTGCGGCATTAACCGTTCATTACGTATCGGCGCTGGGAACGGACAGTTTTAGCCAGCAGa                                                                                  <  1:885012/143‑1 (MQ=255)                                                               cGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCACGTCAGGTCGATCCTGAGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATgg                                                                               >  2:350586/1‑142 (MQ=255)                                                                gagaAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAgctgct                                                                              >  2:114969/1‑143 (MQ=255)                                                                   aaaGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATAGCCCGTCAGGTCGATCCTGCGGCAGTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGa                                                                           <  1:525010/143‑1 (MQ=255)                                                                     aGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATAGCCTGTCAGGGCGATCCTGCGGCACTCACCGTTCATTCCGTAACGGAGCTGGGACCGGACAGTTTTAGCCAGCAGATGCTGGACg                                                                         >  1:803726/1‑143 (MQ=255)                                                                                 tAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCGTTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCg                                                             >  2:951022/1‑143 (MQ=255)                                                                                      gcgGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGCTGCTGGACGCCTGGCACGGCGAGAAc                                                        >  2:429684/1‑143 (MQ=255)                                                                                         gTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                                     <  1:429684/143‑1 (MQ=255)                                                                                         gTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                                     <  2:70667/143‑1 (MQ=255)                                                                                         gTTTCGGCGGCGAGACCCGGAGCCCTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTGCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGtt                                                     <  1:988924/143‑1 (MQ=255)                                                                                                    gATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCt                                          <  1:434777/143‑1 (MQ=255)                                                                                                       aCCCCGAACCCTTCCGTCTATACCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGAc                                       <  2:473279/143‑1 (MQ=255)                                                                                                         ccTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGGTACTTCCCTGAccc                                     >  1:682065/1‑143 (MQ=255)                                                                                                                  ttCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACAGACAGTTTTAGCCACCAGATGCTGGACGCCTGCCACCCCCTGAACCTTGATACGCCCCGGACCCCACgcgcgc                            >  1:314606/1‑138 (MQ=255)                                                                                                                       gcTATATCGCCGGTGGGGTCGGTCCGGCGGCATTAGGCGTTCATTACGTAAGGGCGCGGGGAGCGGACAGTTTTAGCCAGCAGATGCTGGACGGCTGGGACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAAc                       <  1:248067/142‑1 (MQ=255)                                                                                                                           tatCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTc                   <  2:661650/143‑1 (MQ=255)                                                                                                                             tCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTg                 >  2:355197/1‑143 (MQ=255)                                                                                                                             tCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTGAATACTTCCCTGACCCAACGGATGGAAAACCgacca                 >  1:958756/1‑139 (MQ=255)                                                                                                                              cgtccGTCATGTCGATGCTGCTCCATTAACCGTTCATTACGTAACGGCGTTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATCCTTCCCTGACCCAACGGATGGAAAACCGTCTGc                <  2:851543/140‑1 (MQ=255)                                                                                                                                   ttCAGGTCGACCCTCCAGCATTATCCGTTCATTACGTAACCGCGCTGCGAACGGACAGTTTTAACCAGCAGATGCTGTACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGc           <  1:514243/142‑1 (MQ=255)                                                                                                                                   gTCAGGTCGATCCTGCGGCATTAACCGGTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGc           <  2:123753/143‑1 (MQ=255)                                                                                                                                    gacgggcGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGCACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGcc          >  2:661862/7‑143 (MQ=255)                                                                                                                                        gTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCttca      >  1:790908/1‑141 (MQ=255)                                                                                                                                         tCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGACCGATGAAACGTCCCTGGACAAACGGATGGAAAACCGTCTGCCGGGCCTTaac     >  1:510316/1‑143 (MQ=255)                                                                                                                                            aTCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTtactac  <  1:513035/143‑1 (MQ=255)                                                                                                                                              |                                                                                                                                             ATCAGGTTCACGACTATGTCCAAAAAGATTGCCGTGATTGGCGAATGCATGATTGAGCTTTCCGAGAAAGGCGCGGACGTTAAGCGCGGTTTCGGCGGCGATACCCTGAACACTTCCGTCTATATCGCCCGTCAGGTCGATCCTGCGGCATTAACCGTTCATTACGTAACGGCGCTGGGAACGGACAGTTTTAGCCAGCAGATGCTGGACGCCTGGCACGGCGAGAACGTTGATACTTCCCTGACCCAACGGATGGAAAACCGTCTGCCGGGCCTTTACTAC  >  NC_000913/3679403‑3679684

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.