New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	781577 =	46 (1.020)	24 (0.550) +GAAG	3/276	6.6	36.2%	noncoding (1/76 nt)	lysQ	tRNA‑Lys
	?	NC_000913	= 2521004	41 (0.910)					noncoding (76/76 nt)	valU	tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

GACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAC  >  NC_000913/781436‑781711                                                                                                                                              |                                                                                                                                       gACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACGCACAATCCTGAATGATTAAGGCAGGATAATCCTGCAAggg                                                                                                                                       >  1:26565/1‑143 (MQ=255)   cccACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGt                                                                                                                                     <  2:65784/143‑1 (MQ=255)       ccaATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACGCAAACGAATAAGTGATTAAGGAAGCATCACCCCGCCAGGGGGCGtt                                                                                                                                 >  2:344121/1‑143 (MQ=18)        caATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAAGGATTAAGGCAGCATAATCCCGCAAGGGGACGTTa                                                                                                                                >  1:670480/1‑143 (MQ=255)          ttttAGAGGGGGGTACTGGGAGAGAACGGGAAGGATAACGTGGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc                                                                                                                              <  2:21881/142‑1 (MQ=25)          aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc                                                                                                                              >  1:306476/1‑143 (MQ=255)          aTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGAGTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGc                                                                                                                              >  1:121068/1‑143 (MQ=255)             tAAGGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCa                                                                                                                           <  2:523820/143‑1 (MQ=255)                 ggtggtTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGCATGATTAAGGCAGCATAACCCCGCAACGGGCCGTTAGCTCAGTTg                                                                                                                       >  2:293427/1‑143 (MQ=255)                       tACGGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCAGCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTagag                                                                                                                 <  1:773061/143‑1 (MQ=255)                                agaACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGCGCAGTTGACt                                                                                                        >  1:97238/1‑143 (MQ=255)                                 gaACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCGGCACGAGTACAAAACCTTAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtt                                                                                                       >  1:782370/1‑143 (MQ=25)                                   gcGTGAAGGATAACGTGGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtttt                                                                                                     <  2:635953/142‑1 (MQ=255)                                       gAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGGGCAGTTGACTTTTAATc                                                                                                 >  1:27402/1‑143 (MQ=255)                                          gtaTAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                              <  1:676743/141‑1 (MQ=255)                                           gagaaCGGTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                             <  1:324119/140‑1 (MQ=255)                                                 gTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGTGTCGTTAGCTCAGATGGTAGAGCAGTTAACTTATAATCAATGGGTCGc                                                                                       >  2:67865/1‑143 (MQ=37)                                                                    gAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGCATCCTGCACGa                                                                    >  1:273545/1‑143 (MQ=255)                                                                           gagaCGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccccca                                                             >  1:481004/1‑143 (MQ=255)                                                                           cagacgtgatCGAGTCATCCTGCTCGAGCCTCCATCCGGGTTGATTTTGTTATAATAATACCGCTACCGGCCGTAAGTTCAGTTGGTAGAGCACTTGACTCCTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                             <  2:485638/134‑1 (MQ=9)                                                                            agaCGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCGCCaa                                                            >  1:720111/1‑143 (MQ=255)                                                                                gAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCt                                                                          <  1:450495/125‑1 (MQ=255)                                                                                gAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCt                                                                          >  2:450495/1‑125 (MQ=255)                                                                                      gAGTCATCCTGCACGACCCACCATCCTGAATGAGTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGACCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAGCCAACAATGTAACAAAg                                                  >  2:206454/1‑143 (MQ=21)                                                                                        gTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAgcg                                                <  1:512256/143‑1 (MQ=255)                                                                                          cATACTGTACGACTCTTCATACTGAATGATGACTGCAGCAAAATGCCCCAAGTGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACGATTAATCAATTGGACGCAGATTCGGATGCTGCACGACCCACCAATGTAAAAAAGCGcc                                              <  2:57720/143‑1 (MQ=9)                                                                                            tCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCt                                            >  1:445735/1‑143 (MQ=255)                                                                                               tGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCTCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTaaa                                         >  2:199315/1‑143 (MQ=255)                                                                                                gCACGACCCACGATCCGGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAg                                        <  1:189420/143‑1 (MQ=255)                                                                                                gCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAg                                        <  1:554342/143‑1 (MQ=255)                                                                                                  aggacggagcaTCCTGAATGATTAAGGCAGCATAACCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGgc                                      <  1:709932/134‑1 (MQ=255)                                                                                                       ccaccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAGGCGCCCTGACGGCGCttt                                 >  1:297983/1‑143 (MQ=255)                                                                                                       ccaccaTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttt                                 >  2:223741/1‑143 (MQ=255)                                                                                                         accaccCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCttttt                               <  1:662883/143‑1 (MQ=255)                                                                                                          ccaTCCTGGATGTTTTAGGCAGCATACTCCCGCAAGGGGTCGTTAGCCCTGTTGGTAGAGCAGTTGCCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCtttttt                              <  2:221197/143‑1 (MQ=17)                                                                                                           caTCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTATAGCAGTTGACTTTTAATCAATAGGTCGCAGGTTCCAATCCTGCACGACCCACCAATGTAAAAAAACGCCCGaagagcgtcattttc                             >  2:750262/1‑130 (MQ=18)                                                                                                                 gAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTGTGGctctct                       >  2:147369/1‑143 (MQ=255)                                                                                                                  aaTGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTg                      <  1:773495/143‑1 (MQ=255)                                                                                                                     gagtagggCACCATCATCCCGCAGGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa                   <  1:712450/137‑1 (MQ=14)                                                                                                                     gATTAAGGCAGCATAATTCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGa                   <  1:375328/143‑1 (MQ=255)                                                                                                                           ggCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCa             <  1:250184/143‑1 (MQ=255)                                                                                                                                caTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTCTTTGCTATCTGCGATACTCACAGAt        >  2:486749/1‑143 (MQ=255)                                                                                                                                 aTAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGAtt       <  1:431959/143‑1 (MQ=255)                                                                                                                                  taacacccgtatgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAATGGGTACTGCAGGCGCACTTTTGCTATCTGCGATACTCAACGACTc      >  2:760132/13‑143 (MQ=11)                                                                                                                                  tAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTc      <  1:199315/143‑1 (MQ=255)                                                                                                                                     tCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGTGCTTTTTTGCTATCTGCGATACTCAAAGATTCgca   >  1:596990/1‑141 (MQ=255)                                                                                                                                      cccGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAc  <  1:760132/143‑1 (MQ=39)                                                                                                                                              |                                                                                                                                       GACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAAGTCGAGTCATCCTGCACGACCCACCATCCTGAATGATTAAGGCAGCATAATCCCGCAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTAAAAAAGCGCCCTAAAGGCGCTTTTTTGCTATCTGCGATACTCAAAGATTCGAAC  >  NC_000913/781436‑781711

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.