mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.32.0 revision 6ff6de7d1b87
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (lowest skew 10 of 36 shown) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4168397 = | 32 (0.560) | 8 (0.150) | 7/272 | 5.4 | 20.7% | noncoding (27/76 nt) | gltT | tRNA‑Glu |
| ? | NC_000913 | 4209818 = | NA (NA) | noncoding (46/76 nt) | gltV | tRNA‑Glu | |||||
| * | ? | NC_000913 | 3943466 = | NA (NA) | 8 (0.150) | 7/272 | 5.4 | 16.0% | noncoding (33/76 nt) | gltU | tRNA‑Glu |
| ? | NC_000913 | 3943473 = | 44 (0.770) | noncoding (40/76 nt) | gltU | tRNA‑Glu | |||||
| * | ? | NC_000913 | = 2729416 | 29 (0.510) | 8 (0.150) | 7/272 | 5.4 | 22.4% | noncoding (27/76 nt) | gltW | tRNA‑Glu |
| ? | NC_000913 | 3943479 = | NA (NA) | noncoding (46/76 nt) | gltU | tRNA‑Glu | |||||
| * | ? | NC_000913 | = 2729403 | 33 (0.580) | 9 (0.170) | 6/272 | 5.8 | 22.1% | noncoding (40/76 nt) | gltW | tRNA‑Glu |
| ? | NC_000913 | 4168403 = | 32 (0.590) | noncoding (33/76 nt) | gltT | tRNA‑Glu | |||||
| * | ? | NC_000913 | = 2729403 | 33 (0.580) | 9 (0.170) | 6/272 | 5.8 | 22.2% | noncoding (40/76 nt) | gltW | tRNA‑Glu |
| ? | NC_000913 | 3943466 = | NA (NA) | noncoding (33/76 nt) | gltU | tRNA‑Glu | |||||
| * | ? | NC_000913 | = 2729403 | 33 (0.580) | 7 (0.130) | 6/272 | 5.8 | 18.8% | noncoding (40/76 nt) | gltW | tRNA‑Glu |
| ? | NC_000913 | = 2729410 | 29 (0.530) | noncoding (33/76 nt) | gltW | tRNA‑Glu | |||||
| * | ? | NC_000913 | 3915504 = | 54 (0.950) | 6 (0.110) | 5/266 | 6.2 | 10.1% | intergenic (‑305/+48) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit |
| ? | NC_000913 | 3915534 = | 56 (1.050) | intergenic (‑335/+18) | glmU/atpC | fused N‑acetyl glucosamine‑1‑phosphate uridyltransferase/glucosamine‑1‑phosphate acetyl transferase/F1 sector of membrane‑bound ATP synthase, epsilon subunit | |||||
| * | ? | NC_000913 | 2945952 = | 70 (1.230) | 3 (0.070) +33 bp |
3/218 | 6.3 | 5.3% | noncoding (59/97 nt) | RIP206 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site | RIP206 (repetitive extragenic palindromic) element, contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | 3676120 = | NA (NA) | noncoding (1/161 nt) | RIP264 (repetitive extragenic palindromic) element, contains 3 REP sequences and 1 IHF site | RIP264 (repetitive extragenic palindromic) element, contains 3 REP sequences and 1 IHF site | |||||
| * | ? | NC_000913 | = 4556944 | 71 (1.250) | 5 (0.090) | 5/274 | 6.4 | 7.1% | intergenic (‑623/‑50) | yjiC/iraD | uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor |
| ? | NC_000913 | = 4556952 | 62 (1.130) | intergenic (‑631/‑42) | yjiC/iraD | uncharacterized protein/RpoS stabilzer after DNA damage, anti‑RssB factor | |||||
| * | ? | NC_000913 | 4168410 = | 40 (0.700) | 8 (0.150) | 4/272 | 6.9 | 17.3% | noncoding (40/76 nt) | gltT | tRNA‑Glu |
| ? | NC_000913 | 4209805 = | NA (NA) | noncoding (33/76 nt) | gltV | tRNA‑Glu | |||||