New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3525425 =	85 (1.120)	5 (0.070)	5/264	10.2	5.9%	intergenic (+4/+162)	mrcA/nudE	penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase
	?	NC_000913	3525447 =	NA (NA)					intergenic (+26/+140)	mrcA/nudE	penicillin‑binding protein 1a, murein transglycosylase and transpeptidase/adenosine nucleotide hydrolase, Ap3A/Ap2A/ADP‑ribose/NADH hydrolase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCAGCACCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCA  >  NC_000913/3525284‑3525567                                                                                                                                              |                                                                                                                                               cgCAGGTCCTGGCAGTTAGCTAATGGTGCCAACAGGTGTGATGACTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTaaa                                                                                                                                               <  1:1130086/143‑1 (MQ=255)  gcagcaCCGGGCAGGTAGCTAATGGTGGCAACTGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTATGAATaaaa                                                                                                                                              >  2:687354/1‑143 (MQ=255)   cggcaCCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTaaaaa                                                                                                                                             <  1:774182/141‑1 (MQ=255)     gcaGCGGGCAGTTAGCTAAGGGTGGGAACAGCCGCGAAGAGTATTGCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTAGCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAgg                                                                                                                                           <  1:108484/143‑1 (MQ=255)      caCCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGgc                                                                                                                                          >  1:912707/1‑143 (MQ=255)       aCCGGGCAGTTAGCTAAGGGGGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGTGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGgcg                                                                                                                                         <  1:371283/143‑1 (MQ=255)           ggCAGGTAGCTAATGGTGGCAACAGCCGCTAAGAGTATTTCATCGAATGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTc                                                                                                                                     <  2:429574/143‑1 (MQ=255)              agtgagcggtgggtggCGACGGGCGCGAAGAGTAGCTCGTCGGAGGGACGCAGCCGACACAACAGGCAGTGCACGGGGTGGGAACGACGATTATCGATAATGGCGAGGCGCAGGAATTGTTCTGATTAAAAAGGCGCTTCGgc                                                                                                                                  <  2:291037/132‑1 (MQ=255)              aGTTAGCTGAGGGTGGCCACAGCCGCGAAGAGTATCTCATCGAAGGGACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGgc                                                                                                                                  <  1:645341/143‑1 (MQ=255)              aGTTAGCTAATGCTGGCAACAGCCGCTATGAGTATTTCATCGAAGGTACGCAGCAGACACAACAGGCAGTTCACGAGGTGGGAACGACCATTATCGATAATGGCGATGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGgc                                                                                                                                  <  2:69585/143‑1 (MQ=255)              aGTTAGCGAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGgc                                                                                                                                  <  1:1285778/143‑1 (MQ=255)                ttAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCGTCGgcgc                                                                                                                                >  1:446593/1‑143 (MQ=255)                  aGCCAATGGGCGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCt                                                                                                                              <  1:802266/143‑1 (MQ=255)                   gctaggggtggGAACAGCCGCGAGGGGTATCGCAGCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCAGTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCtt                                                                                                                             <  2:1178352/137‑1 (MQ=255)                     tAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCtttt                                                                                                                           >  1:1296595/1‑143 (MQ=255)                          gtggCAACAGCCGCGAAGAGAATTTCATATATGATACAAAGCCGACACAACAGGCAGTGCACGAGGTGGTAACGACCAAAATGTATAATGGCTTGGTTCATAATTTTTTCTGATTAAAAAGTTGGTGCCGCGCCTATTCAGtt                                                                                                                      >  2:1001662/1‑143 (MQ=255)                           tggCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTACAAAGGCGCTTCGGCGCCTTTTCAGttt                                                                                                                     >  1:26714/1‑143 (MQ=255)                             gCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGc                                                                                                                   <  1:1047896/143‑1 (MQ=255)                              cAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCt                                                                                                                  >  2:360920/1‑143 (MQ=255)                                aCAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCAGCGCCTTTTCAGTTTGCTgc                                                                                                                >  1:1210615/1‑142 (MQ=255)                                         agtagTATTTCAACGAAGGTACGCAGCCGATACAACAGGCAGTGCGCGAGGTGGGAACGACCATTATCGATGATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCa                                                                                                       <  2:725276/140‑1 (MQ=255)                                         aaGAGTATGTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACATGAATTGTTCTGATTAAAAAGGCGCGTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCa                                                                                                       <  1:584681/143‑1 (MQ=255)                                                tttCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGttt                                                                                                >  1:1256658/1‑143 (MQ=255)                                                tgtCAGCGAAGGGACGCAGCCGACGCAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGTTTAAAAATGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGttt                                                                                                <  2:589666/141‑1 (MQ=255)                                                  ataTCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTAt                                                                                              <  1:776611/141‑1 (MQ=255)                                                   cagcGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATg                                                                                             <  2:1058018/140‑1 (MQ=255)                                                     tCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCAGTTGTTTATGcc                                                                                           >  1:406726/1‑143 (MQ=255)                                                       gAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGGGGGAACGACCATTATCGATAATGGCGGGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCgg                                                                                         >  1:1003115/1‑143 (MQ=255)                                                        gaGGGACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGa                                                                                        <  1:234322/142‑1 (MQ=255)                                                        aaGGTACGCAGCCGACACCACAGGCAGTGCACGAGGGGGGAACGACCATTATGGATGATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGa                                                                                        <  1:22783/143‑1 (MQ=255)                                                        aaGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGa                                                                                        >  1:593273/1‑143 (MQ=255)                                                          ggcaCGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATa                                                                                      <  2:1103407/140‑1 (MQ=255)                                                          ggTACGCAGCGCACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATa                                                                                      <  1:1200879/143‑1 (MQ=255)                                                          ggTACGCAGCCGACACGACAGGCAGTGGACGAGGTGGGAACGACCATTATCGATGATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATa                                                                                      <  2:1103462/143‑1 (MQ=255)                                                               gCAGCCGACACAACAGGCAGTACAAGAGGAGGGAACGACCATTATCGATAATGGCGAGGAACAGGAATTGATCTGATAAAAAAGGAGGTTCGGCGCATTTTCAGTTTGCTGACAAAGTCCACTTGTTTAAGCCGGATACcgcg                                                                                 >  2:409593/1‑143 (MQ=255)                                                                cAGCCGCCACCACCGCCAGCGCACGACGTGCGAACGACCATTATCGATCATGGCGAGGCACAGGAATTGTTCTGATTACAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGt                                                                                <  1:504366/143‑1 (MQ=255)                                                                    cGACACAACAGGCAGTGCACTAGGTGGGTACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAAc                                                                            <  2:765338/143‑1 (MQ=255)                                                                        acaccaGGCAGTGCACGGGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGt                                                                        <  1:284849/143‑1 (MQ=255)                                                                          aacaGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCGCTTGTTCATGCCGGACACGGCGTGAAcggctta                                                                      >  2:1201744/1‑138 (MQ=255)                                                                          aacaGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGCTACGGCGTGACCGCGTTa                                                                      >  1:510031/1‑143 (MQ=255)                                                                           acaGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGTGGGTGGGCAGCCCGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTAt                                                                     >  1:1308959/1‑143 (MQ=255)                                                                            caGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATc                                                                    >  1:1221365/1‑143 (MQ=255)                                                                               gCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCgg                                                                 <  2:754997/143‑1 (MQ=255)                                                                               gCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCCGAGTGAGAAGTCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCgg                                                                 <  1:301679/143‑1 (MQ=255)                                                                                 aGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCt                                                               >  1:1277820/1‑143 (MQ=255)                                                                                 aGTGCACGAGGTGGCAACGACCATTATCGATAATGGCGAGGCACAGGGATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGCCGCCAACGCGTTATCCGCCt                                                               >  1:1259973/1‑143 (MQ=255)                                                                                    gCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACCAAATGTACTTTTTTATGCTGGATGCGGCGTGAACGCGTTATCCGGCTAAc                                                            >  1:110766/1‑143 (MQ=255)                                                                                    gCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAAATGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGGTATGCGGCTAAc                                                            >  2:400123/1‑143 (MQ=255)                                                                                    gCACGAGGTGGGAACGACAATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTATGCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAAc                                                            <  1:593830/143‑1 (MQ=255)                                                                                     cACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACa                                                           >  2:225035/1‑143 (MQ=255)                                                                                      aCGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTCTCCGGCTAACaa                                                          >  2:251223/1‑143 (MQ=255)                                                                                           gTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACCAACTGCACTTCTCCATGCCGGATACGGCGTGAACGCGCTACCCGGCTCACAGAATCg                                                     >  2:296751/1‑143 (MQ=255)                                                                                             gggAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTg                                                   >  1:577402/1‑143 (MQ=255)                                                                                              ggAACGACCATTATCGATACTGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGCCGCCTTTTCCGTTTGCTGACCAAGTGCACTTGTCTATGCCGCATACTGCGTCAACGCGGTACCCGGCCAACagcctcctta                                                  >  2:1015351/1‑134 (MQ=255)                                                                                                 aCGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCTGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGaaaa                                               <  1:691137/143‑1 (MQ=255)                                                                                                   gACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAACACt                                             >  1:297856/1‑143 (MQ=255)                                                                                                        ttATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAACACTcccta                                        >  1:1229649/1‑139 (MQ=255)                                                                                                           tCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAAt                                     <  1:1079232/143‑1 (MQ=255)                                                                                                            cGATAATGGCGAGGCAGAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAAtt                                    <  1:1299830/143‑1 (MQ=255)                                                                                                            cGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAAtt                                    >  2:337165/1‑143 (MQ=255)                                                                                                             gATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTg                                   <  1:1177056/143‑1 (MQ=255)                                                                                                             gATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTg                                   >  1:192168/1‑143 (MQ=255)                                                                                                              agaaTGGCGAGGGACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGc                                  <  2:446593/141‑1 (MQ=255)                                                                                                               tAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGGTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCa                                 <  2:246100/143‑1 (MQ=255)                                                                                                                aaTGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTCACAAAATCGTGAACACTCACTAAATTGCAg                                >  1:228593/1‑143 (MQ=255)                                                                                                                     cGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCATGTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAAcc                           >  1:1271075/1‑143 (MQ=255)                                                                                                                          cacaGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATa                      <  2:1181772/143‑1 (MQ=255)                                                                                                                           acaGGAATTGTTCTGATTAAGAAGGCGCTTCGGCGCCTTGGCAGTTTGCTGACAAAGTGCACTTGTTTATGACGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATaa                     <  2:1318370/143‑1 (MQ=255)                                                                                                                              ggAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGcc                  <  1:807535/143‑1 (MQ=255)                                                                                                                               ggagtGTTCTGATGAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCt                 <  2:1096372/139‑1 (MQ=255)                                                                                                                               gAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATAGCAGAAACCCAATAAGCCt                 >  2:823530/1‑143 (MQ=255)                                                                                                                                  ttGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGAt              <  2:711251/143‑1 (MQ=255)                                                                                                                                   tGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGCAACCCCATACGCCTGATa             >  1:1137649/1‑143 (MQ=255)                                                                                                                                     ttCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGGAGAAACCCCATAAGCCTGATaaa           >  1:816986/1‑143 (MQ=255)                                                                                                                                     ttCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGAAGTCATGCCAGAGGTCTGATaaa           >  1:1015935/1‑143 (MQ=255)                                                                                                                                     ttCTGATTAAAAAGGCGCTGCGGGGCCTTTTCAGTGTGCTGACAAAGTGCACTTGTTTATGCGGGATAGGGAGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATaag           >  2:659722/1‑142 (MQ=255)                                                                                                                                      tCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAACCTCAATAAATTGCAGAAACCCCATAAGCCTGATAAAc          >  2:732367/1‑143 (MQ=255)                                                                                                                                      tCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCACTCAATTGCAGTAACCCCATCATCCTGCTAAAc          >  1:556610/1‑143 (MQ=255)                                                                                                                                        tGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACAt        >  1:373927/1‑143 (MQ=255)                                                                                                                                         gATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGGACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATCAATTGCAGAAACCCCATAAGCCTGAGAAACagt       >  2:193841/1‑141 (MQ=255)                                                                                                                                         gATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACAtt       >  1:515783/1‑143 (MQ=255)                                                                                                                                            tAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGACGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtgtg    >  2:217870/1‑143 (MQ=255)                                                                                                                                            tAAAAAGGCGCTTCGGCGCCTGTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATtgtg    <  2:559274/143‑1 (MQ=255)                                                                                                                                             aaaaaGGCGTTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc   <  1:861309/143‑1 (MQ=255)                                                                                                                                             aaaaaGGCGCTTCGGCGCGTGTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGc   <  2:607749/143‑1 (MQ=255)                                                                                                                                              aaaaGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCa  >  1:402680/1‑143 (MQ=255)                                                                                                                                              |                                                                                                                                               CGCAGCACCGGGCAGTTAGCTAATGGTGGCAACAGCCGCGAAGAGTATTTCATCGAAGGTACGCAGCCGACACAACAGGCAGTGCACGAGGTGGGAACGACCATTATCGATAATGGCGAGGCACAGGAATTGTTCTGATTAAAAAGGCGCTTCGGCGCCTTTTCAGTTTGCTGACAAAGTGCACTTGTTTATGCCGGATACGGCGTGAACGCGTTATCCGGCTAACAAAATCGTGAAAACTCAATAAATTGCAGAAACCCCATAAGCCTGATAAACATTGTGCA  >  NC_000913/3525284‑3525567

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.