| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,001,644 | Δ5 bp | coding (220‑224/951 nt) | corA → | magnesium/nickel/cobalt transporter |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4001644 | 4001648 | 5 | 52 [0] | [0] 53 | corA | magnesium/nickel/cobalt transporter |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4001643 | 0 (0.000) | 52 (0.950) | 43/284 | 0.2 | 100% | coding (219/951 nt) | corA | magnesium/nickel/cobalt transporter |
| ? | NC_000913 | 4001649 = | 0 (0.000) | coding (225/951 nt) | corA | magnesium/nickel/cobalt transporter | |||||
GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > NC_000913/4001507‑4001786 | agtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatc < 2:577561‑M2/1‑1 (MQ=255) gtatggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatct > 2:421556‑M2/142‑143 (MQ=255) atggtttgatcttgtcgaaccggacgacggcgatcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:439438‑M2/4‑1 (MQ=255) atggattgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 2:362567‑M2/4‑1 (MQ=255) atggattgagcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTcc < 1:421833‑M2/4‑1 (MQ=255) ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtaccatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcgtcggcacgtctctttgacgacgacgccgacctgcaaCCccttctc > 1:659797‑M2/135‑142 (MQ=255) ttgatcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgccgacggcctgcacCTCcttctt > 1:696700‑M2/135‑143 (MQ=255) ctgatctggtcgaaccggaggacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCcttctt < 1:866897‑M2/9‑1 (MQ=255) tcttgtcgaaccggacgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcctCCCcctcttcctc > 1:847666‑M2/131‑143 (MQ=255) ccgacccggacgacgacgagcgagtgcgggtacgatcggaacttggccagagcctggcaacccgcccggaactggaagacctcgaagcatcggcacgtttctttgaagacgacgccggcctgcatCTCCTTCTTCTTCTTTGa < 2:283181‑M2/18‑1 (MQ=255) cgaaccggacgacgacgagcgacggcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGaa < 2:785246‑M2/19‑1 (MQ=255) acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 1:608748‑M2/27‑1 (MQ=255) acgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGa < 1:281475‑M2/27‑1 (MQ=255) cgacgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGaa < 2:545737‑M2/28‑1 (MQ=255) gctgcgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgtagcatcggcacgtttctttgaagtcgacgacggcttgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa < 1:508820‑M2/30‑1 (MQ=255) acgacgagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGa < 2:419460‑M2/30‑1 (MQ=255) tgcagcggctgcgcgtgcaagctgaagttggccagagtctggcaacccgcccggaactggaagacatcgcagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCa < 1:466247‑M2/33‑1 (MQ=255) gagcgactgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGACGATGCGGTCGCTCACg > 2:43957‑M2/109‑143 (MQ=255) tgcgcgtacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTaa < 2:120544‑M2/42‑1 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAc < 2:44136‑M2/48‑1 (MQ=255) tacaatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtctctttgaagacgacgccggcgtgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCGCGTAACTCCAc > 1:878360‑M2/96‑143 (MQ=255) aatctgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGGAACTCCACtgt > 1:791071‑M2/93‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCAGTGTGGCa > 2:824884‑M2/89‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACAGAGGCa > 2:816106‑M2/89‑143 (MQ=255) tgaacttggccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTGCTTTGAAGATGCGGAGGATCACGCCGGTAACTCCACTGTGGCa > 2:592629‑M2/89‑143 (MQ=255) ccagagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATc > 2:668998‑M2/80‑143 (MQ=255) gagcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGt < 2:930821‑M2/67‑1 (MQ=255) gcctggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGa < 2:223358‑M2/69‑1 (MQ=255) cctggcaccccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGGGAt > 1:388333‑M2/74‑143 (MQ=255) ttggcaacgcgcccgtaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATg < 2:475142‑M2/71‑1 (MQ=255) tggcaacccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTGCTTGTTCTTTGAAGCTGCGGAAGATCACGCCGGTAACTCCACtacgtcatttaccgcgcgagagag > 1:60179‑M2/72‑132 (MQ=255) ccgcccggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCCTTTACCCTCCGTGATGGTCGTCTg > 2:769541‑M2/65‑143 (MQ=255) gcccggaactggaagacatcgaagcatcggcgcgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGtt < 1:729745‑M2/81‑1 (MQ=255) ccggaactggaagacatcgaagcatcggcacgaaaaacttaagtctacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTa < 2:396896‑M2/83‑1 (MQ=255) ggaactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTAct < 2:918950‑M2/85‑1 (MQ=255) aactggaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTActct < 1:421556‑M2/87‑1 (MQ=255) ctggaagacatcgaagcagcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgc < 2:866025‑M2/89‑1 (MQ=255) gaagacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTGCTCTgcgtg > 2:13635‑M2/52‑143 (MQ=255) acgacatcgaatcctcggcacgtttctttgcagacgaccacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtga < 1:473989‑M2/93‑1 (MQ=255) gacatcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagc > 2:6144‑M2/49‑143 (MQ=255) catcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgtgagcgt < 1:611346‑M2/97‑1 (MQ=255) atcgaagcatcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTgcgcgagcgtg > 1:71622‑M2/46‑143 (MQ=255) cgacgcatcggcacgtttctttgaagacgacgacggcctgcatCTCCGTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGaa < 1:358785‑M2/100‑1 (MQ=255) tcggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGGGTgagagtgaagtcccac > 2:347980‑M2/37‑136 (MQ=255) cggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATTTTCGGCGGTTTACTCTGCGTGAGCGTGAACTGCCCGc < 2:907784‑M2/108‑1 (MQ=255) ggcacgtttctttgaagacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGCGATGGTCGTCTGTTTGCTCTGCGTGCGCGTGCACTGTCCGCt > 2:326563‑M2/35‑143 (MQ=255) gaagaggacgacggcctgcatCTCCTTCTTCTTCTTTTAAGATGCGGAAGATCACGCCGGTAACTCCTCTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATc < 1:392207‑M2/122‑1 (MQ=255) atgacgacggcggcgtgctgCTCGTTCTTCTTCTTTGAGGAGGCGGATGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAAGTGCCCGCTTTTCGTCTGTATCg < 1:916955‑M2/123‑1 (MQ=255) gacgacgacggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATAACGCCGGTAGATCCACTGTGGCATTTACAATCAGTGATGGTCGTCAGTTTGCTCTGCGGGAGCGTGAACTGCCTGCTTTTGGTCTGTAGCGTa > 2:193577‑M2/19‑143 (MQ=255) cgacggcctgcatCTCCTTCTTCTTCTTGGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATGTACCATCCGTGTTGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGt < 2:378340‑M2/130‑1 (MQ=255) ggcctgcatCTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACCGTGGCATTTACCATCCGTGATGGTCGTCTGTTGCCTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTGTCGTACGCGTGgcc > 2:63511‑M2/10‑143 (MQ=255) cttcaccTCCCTCTTCATCTTTGGACAGGCGGAATATCACGCCTGTACCTCCACGGTGGCATTTACCATCCGTGATTGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTa < 1:824884/137‑1 (MQ=255) tgcatTTTCTTCTTCTTCTTTGAAGATGCGGAAGATCTCGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCTTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAg < 1:389846‑M2/138‑1 (MQ=255) | GGATTGATCTTGTCGAACCGGACGACGACGAGCGACTGCGCGTACAATCTGAACTTGGCCAGAGCCTGGCAACCCGCCCGGAACTGGAAGACATCGAAGCATCGGCACGTTTCTTTGAAGACGACGACGGCCTGCATATTCACTCCTTCTTCTTCTTTGAAGATGCGGAAGATCACGCCGGTAACTCCACTGTGGCATTTACCATCCGTGATGGTCGTCTGTTTACTCTGCGTGAGCGTGAACTGCCCGCTTTTCGTCTGTATCGTATGCGTGCCCGTAG > NC_000913/4001507‑4001786 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |