New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1533706	51 (1.330)	3 (0.080)	3/272	5.5	5.6%	coding (146/570 nt)	yddH	flavin reductase like‑protein
	?	NC_000913	= 1533713	53 (1.440)					coding (139/570 nt)	yddH	flavin reductase like‑protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGT  >  NC_000913/1533578‑1533854                                                                                                                                        |                                                                                                                                              acacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCAcc                                                                                                                                        <  2:451256/143‑1 (MQ=255)  cacacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGCTCACGATGCCCAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGCTTTCTCTACCACACTCGCGACGCCGGGAGGTTCCAACTCCACCg                                                                                                                                       >  2:178985/1‑143 (MQ=255)    cacTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGc                                                                                                                                     >  2:26905/1‑143 (MQ=255)       ttCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGACGTTCAAACTCCACCGGCact                                                                                                                                  >  2:33470/1‑141 (MQ=255)       ttCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGGTATGTTCAATCAACTCCCTGCTCCATGTCGATTTCTCTACCACAATCGCCACGCGTGGAGGTTCAAACTTAACCAGCaat                                                                                                                                  >  2:241323/1‑141 (MQ=255)        tCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCACTg                                                                                                                                 >  1:346129/1‑143 (MQ=255)         cccACCGCCCACGTCCAGTTAGTTGCTGCAACACCCGGGATAACGATGCCACATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGa                                                                                                                                >  1:353671/1‑143 (MQ=255)          ccACCGCCTCCGTCCAGTTAGTTGCTGCATCGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCACCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGAc                                                                                                                               <  2:651088/143‑1 (MQ=255)           cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATATATCACGATCACCACGCGTGGAGGTTCACACTCCACCGGCATCGAcc                                                                                                                              >  1:138997/1‑143 (MQ=255)           cACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGACGCCAAATTTACCGTTATGTGCAATCAACTCCCTGGTCCACGTCGAATTATCTACCCCAATCGCCACCCGCGGCGGTCCATACTCCACCCGCACTGAcc                                                                                                                              >  1:315630/1‑143 (MQ=255)                    cGTCCAGTTAGTTGCTGCAGCGCCCGGGATAACGAGGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAg                                                                                                                     <  1:123367/143‑1 (MQ=255)                        cAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCACCTTTACCGTTATGCTCGATCAACTCCCTGGTCCCTGTCCCTTTTTCTACCACAACCTCCACGCTCTGAGGCTCCAACCCAACCGGCCTTGACCACGccacatccct                                                                                                                 >  2:641662/1‑134 (MQ=255)                               ttGCTGCAACGTCCGGGATAACGAGGCCGTATTTACCGTGATGTTCAATCAGCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTa                                                                                                          <  1:55515/143‑1 (MQ=255)                                       aCGCCCGGGGTAACGCTGCCAAATTTACCGTTAGGTTCAATGAGCGCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCGGCAGCCATAATGTTACGCCGCTg                                                                                                  <  2:290369/143‑1 (MQ=255)                                             tgcaTAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTg                                                                                            <  1:27681/140‑1 (MQ=255)                                                  aaCGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCAt                                                                                       >  1:25158/1‑143 (MQ=255)                                                   ccgttgccacttctACCGTTATGTTCACTCACCTCCCTGGTCCATCTCGATTTATCTCCCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATc                                                                                      <  1:612643/130‑1 (MQ=255)                                                    cGATGCCAAATTGACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGGGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCg                                                                                     <  1:608218/143‑1 (MQ=255)                                                          cAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                               >  2:223470/1‑143 (MQ=255)                                                          cAAACTTACCGTTATGTTCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTg                                                                               <  2:138416/143‑1 (MQ=255)                                                           aaaTTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTgg                                                                              >  2:580408/1‑143 (MQ=255)                                                            aaTCTACCGTGATGCTCAATCGACTCCCTGCTCCATGTCGATTTACCTACCACAATCGCCACGCGTGGAGTTTCACACGCCACCGGCCTTCACCAACCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGt                                                                             <  2:254220/143‑1 (MQ=255)                                                             agttgcggTTATGTTCAATCACCTCCCTGGTCCATGTCGCTTTATCTACCACCATCGCCACGCGTGGAGGTTCAAACTCCGCCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTg                                                                            <  1:634502/136‑1 (MQ=255)                                                              cttACCGTTCTGTTCATTCAACTCCCTCGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTCCAAACGCCACCGGCAGTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGa                                                                           <  2:207445/142‑1 (MQ=255)                                                               ttACCGTTATGTTCACTCAACTCCCGGTTCCATGTCGAGTTATCTACCACAAGCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGAt                                                                          <  1:456363/143‑1 (MQ=255)                                                               ttACCGTCATGTTCAATCAGCTCCCTGGTCCAGGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACGCCACCGGCATTGACCACGCTGAAGTCACTATATTTTGCGGCTTGGATTGCTCATCGAAACTGGTGAt                                                                          <  2:642283/143‑1 (MQ=255)                                                                  ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCGAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                                       <  2:353671/143‑1 (MQ=255)                                                                  ccGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACAGGCATAAACCAAGCTTTAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCaa                                                                       >  2:491394/1‑143 (MQ=255)                                                                          ttCCATCAACTCCCTGGTCCATGTCGATTTATCTACCACAAACGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGCTTGCTCATCGCAACTGGTGATCAAGACCGGTg                                                               >  1:589190/1‑143 (MQ=255)                                                                            caatcacCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTggg                                                             <  2:570700/143‑1 (MQ=255)                                                                             aatcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGCTCAAGACCGTTGGGc                                                            >  1:233204/1‑143 (MQ=255)                                                                              atcaaCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATCGCTCATCGAAACTGGTGCTCCAAAGCATTGGGcc                                                           >  1:421224/1‑143 (MQ=255)                                                                                cggcTCCCTCGTCGCGGTCGATTGTTCTACCACCATCGCCTCGCGTGGAGGTTCAAACTGCACCGGCATTGACCAGGCTGCAGCTATAATGTTACGCCGCTGGGATTGCTCATCGTAACTGGTGATCAAGACCGTTGGGCCAt                                                         <  1:198077/140‑1 (MQ=255)                                                                                 aacgtccTGGGCCATGTCGATGTACCTACCACAATCGCCACGCGTCGAGGTTCAAACTCCACCGGGTTTGACCAGGCTGCAGCCATAATGTGAGGCCGCTGGGAGTGCTCAGCGAAACTGGTGATCAAGACCGTTGGGCCATg                                                        <  1:94719/138‑1 (MQ=255)                                                                                  aCTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTCCGCCGCTGGGATTGCTCATCGAAACCGATGATCCCGACCggctggccacca                                                       >  1:611843/1‑132 (MQ=255)                                                                                    tCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGAtt                                                     <  2:436151/143‑1 (MQ=255)                                                                                        cggTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAAc                                                 <  2:78875/142‑1 (MQ=255)                                                                                                 tCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGAAGGCTg                                        >  2:131625/1‑143 (MQ=255)                                                                                                      ttATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATg                                   <  2:25158/143‑1 (MQ=255)                                                                                                           tACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGACTTAACAGACGGCTGGCATGGAGTa                              >  2:466178/1‑143 (MQ=255)                                                                                                            aCCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTaa                             <  1:26905/143‑1 (MQ=255)                                                                                                              cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtt                           >  2:101688/1‑143 (MQ=255)                                                                                                              cacaATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGATACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAAtg                           >  2:171562/1‑142 (MQ=255)                                                                                                                   tCGCCACCCGTGGACGTCCAAACCCCACCGGCATTGGCCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATg                      <  2:655638/143‑1 (MQ=255)                                                                                                                      ccccgcgTGGGGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg                   <  1:624604/140‑1 (MQ=255)                                                                                                                      ccACGCGTGGAGGTTCAAACTCCACCGGCATGGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATgggg                   <  2:474123/143‑1 (MQ=255)                                                                                                                          gcgTGGAGGTTCAAACCCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa               <  2:138997/143‑1 (MQ=255)                                                                                                                          gcgTGGACGTTTATTCTCCACCGGTATTGTCCGGTCTGCAGCAATAACGTTATGCCGCTGGTATTGCTCATCGAAACTGGTGAACAAGACCGTTGGGTTATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGa               <  1:251574/143‑1 (MQ=255)                                                                                                                           ctttgtagTTCAACCTCCACCGGCATTGACCAGGCTGCGTCGATGATGTTACGCCGCTGGGAGTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGaa              <  1:533640/136‑1 (MQ=255)                                                                                                                            gTGGAGGTTCAGACTCCACCGGCATTGGCCGGGCTGCAGCCATACTGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGCCCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAAt             <  2:58930/143‑1 (MQ=255)                                                                                                                               tagtttCAAACCCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACTGACGGCTGGCATGGTGTAATTCTATGGGGATGAATCgg          <  2:186278/139‑1 (MQ=255)                                                                                                                                  gttgcaaCTCCTCCGGATTTGACCTGGCTGCAGCGATACTGTTACGACGGTGTGATTGCTCATCGAAACTGGTGAGCTAGTTCTTTGTGCCATGATTTAGCAGATGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTc       <  1:65325/138‑1 (MQ=255)                                                                                                                                       aaCTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCGCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGGGAGATGCTATGGGGATGAAGAGGCACATgat  >  1:322666/1‑141 (MQ=255)                                                                                                                                        |                                                                                                                                              ACACACTTCCCACCGCCCACGTCCAGTTAGTTGCTGCAACGCCCGGGATAACGATGCCAAATTTACCGTTATGTTCAATCAACTCCCTGGTCCATGTCGATTTATCTACCACAATCGCCACGCGTGGAGGTTCAAACTCCACCGGCATTGACCAGGCTGCAGCCATAATGTTACGCCGCTGGGATTGCTCATCGAAACTGGTGATCAAGACCGTTGGGCCATGATTTAACAGACGGCTGGCATGGTGTAATTCTATGGGGATGAATCGGCTCATGGT  >  NC_000913/1533578‑1533854

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.