New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1470336 =	NA (NA)	32 (1.070)	3/284	4.3	NA	coding (979/1152 nt)	insI1	IS30 transposase
	?	NC_000913	= 1979270	NA (NA)					intergenic (‑55/‑483)	insA/uspC	IS1 repressor TnpA/universal stress protein
Rejected: Coverage evenness skew score above cutoff.

CTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1470476‑1470336 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAG  <  NC_000913/1979270‑1979148                                                                                                                                                                                                                                                                          ctgTTTCGGTGTTTTAACCCTCTGTGTTTTTCTCGGCCTGTTGTTTAGCGGAGCGGCAACCAGATCTAGTGCATGTTGAGTATATTGGTCAAGACATGTCTTGTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGG                                                                                                                           <  1:220870/140‑1   cttcctGTGTTGTGAACTTCAGGGTTTTTTTCAGTCTGTTGTTTTGCTGAGCATGTACCAGATCTAGGTCATGTTGAGTATATTGGGCAAGACATGTTTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTG                                                                                                                         <  1:205919/137‑1     TTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTGTCGGTGAT                                                                                                                       >  2:442481/1‑143            TTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCA                                                                                                                >  1:385454/1‑143                         TGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTA                                                                                                   <  2:441693/143‑1                            CTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTG                                                                                                >  2:251826/1‑143                             TTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACGTGTTTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTAATGAAATAGTGT                                                                                               >  1:130514/1‑143                             TTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGT                                                                                               >  2:114540/1‑143                              TTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGACTTAGTGTA                                                                                              >  1:345378/1‑143                                  CGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAACTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGAT                                                                                          >  1:423083/1‑143                                   ggtctgttaccgAGCTGACCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                         <  2:68427/131‑1                                   GGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATG                                                                                         <  2:370851/143‑1                                         TTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTT                                                                                   >  2:58201/1‑143                                         TTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACGGAGTGAGCGGATGCTGGTGTTT                                                                                   >  1:265787/1‑143                                                        GCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGT                                                                    <  2:399097/143‑1                                                           ACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGC                                                                 >  1:16761/1‑143                                                            CCAGAGCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGCAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCT                                                                <  2:296784/143‑1                                                              AGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTC                                                              >  2:62076/1‑143                                                               GATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCACCTTACTGATTTAGTGTATGATGGTGTTTTTGAGTTGCTCCAGTGGCTTCT                                                             >  2:523879/1‑143                                                                   tcgtcctTGTTGTGTCTCTTGGGCTAGACATGTCTTTTTAGGAAAGTACGGCCGGATTAGCCCCTGTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTT                                                         <  1:395558/136‑1                                                                     gctccTGTTGCGCATATTGGGCGTGTCTTGTCTTTGTAGGGTAGTTCTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCCGTGGCTTCTTTTTCT                                                       <  1:134571/138‑1                                                                       TCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTAT                                                     >  2:385661/1‑143                                                                          TGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTGTCTATCAG                                                  >  1:147432/1‑143                                                                               acTATTTTGGACAAGACATGTCTTTTTTGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGTTTTAGTGTATGATGGTGTTTTTGACGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTC                                             <  1:138520/141‑1                                                                                       cGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGT                                     <  2:408465/142‑1                                                                                                      TTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGAGTTAGTGTGTGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTCCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGG                      >  1:311366/1‑143                                                                                                       TTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTGTGTTTCTATCAGCTGTCCCTCCTGTTCAGCCACTGCCGGGG                     >  1:335765/1‑143                                                                                                              AAGTACTGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCG              <  2:28988/143‑1                                                                                                                   cgGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG         <  2:185177/141‑1                                                                                                                   CTGCCGAATTAGCCCATGTGTGTCCGCGGTGATGGTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACG         <  2:363583/143‑1                                                                                                                    TGCCGAATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGG        <  2:486392/143‑1                                                                                                                          ATTAGCCCATTTGTGTTCTCGGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGAAGGGGTGGGGCGTGACGGCACAAG  >  2:306933/1‑143                                                                                                                                                                                                                                                                          CTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1470476‑1470336 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTGTCCCTCCTGTTCAGCTACTGACGGGGTGGTGCGTAACGGCAAAAG  <  NC_000913/1979270‑1979148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.