New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3424225NA (NA)5 (0.120) 3/280 6.5 NA noncoding (2557/2904 nt) rrlD 23S ribosomal RNA of rrnD operon
?NC_000913 = 3424230 NA (NA)noncoding (2552/2904 nt) rrlD 23S ribosomal RNA of rrnD operon
Rejected: Coverage evenness skew score above cutoff.

CACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAAC‑AGCATCACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGC  >  NC_000913/3424094‑3424327
                                                                                                                                   |                                                                                                       
cacCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGCTAGGGCCCGAACTGTCTCACGACGTTCTCAACCCAGCTCGCGCACCCCCTTCCATGGccaccacccatc                                                                                              >  1:333729/1‑132 (MQ=1)
  ccAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTACTCCAGCACCCGCGGCCCATAGGGCCCGAACTGTCTCGCGACCAACCAAACCCAGCCCGCGTACCACTTTAGATGGCGACC‑Aggcagacc                                                                                           >  1:116728/1‑136 (MQ=1)
                                                                                           cACGACGTTCGAATCCCAGCTCGCTCACCACTTGAGATGGCACCCAAACGACCCCGTTCGCA‑CTCCTTGAACCCCATTATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGc  <  1:154399/143‑1 (MQ=0)
                                                                                                                                   |                                                                                                       
CACCAGTGATGCGTCCACTCCGGTCCTCTCGTACTAGGAGCAGCCCCCCTCAGTTCTCCAGCGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTAAACCCAGCTCGCGTACCACTTTAAATGGCGAAC‑AGCATCACCCTTGGGACCTACTTCAGCCCCAGGATGTGATGAGCCGACATCGAGGTGCCAAACACCGCCGTCGATATGAACTCTTGGGCGGTATCAGC  >  NC_000913/3424094‑3424327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.