New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 659191 = | 110 (0.890) | 8 (0.070) | 8/270 | 14.9 | 7.4% | intergenic (+41/+60) | tatE/lipA | TatABCE protein translocation system subunit/lipoate synthase |
? | NC_000913 | 659221 = | 100 (0.890) | intergenic (+71/+30) | tatE/lipA | TatABCE protein translocation system subunit/lipoate synthase | |||||
Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Rejected: Frequency below/above cutoff threshold. |
CCGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/659351‑659191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgggttttttATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGCCAGCGCTTCGGCTTTCATTTCGTCGAAC > NC_000913/659221‑659368 CCGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTGGTCCGCTCTTCTTACCACGACGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGA > 2:696405/1‑149 CGAAGCGCTGGCGATGGGCTTTACCCATGGTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAA < 1:720294/149‑1 CGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAA < 1:720343/149‑1 CGAAGCCCTGGCGATGGGCTTTACCCATCCTGCATGCGGCCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAA < 1:720698/149‑1 GAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAG > 1:1753640/1‑149 GAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAG > 1:863628/1‑149 GAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAG < 1:1984556/149‑1 AAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGC < 2:1847141/149‑1 AAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGC < 2:1930515/149‑1 AGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCG < 2:811287/149‑1 GCGCTGGCGATGGGCTTTACCCATTCTGCATGCGGGCCGTTTGGCCGCGCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGCAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGG < 2:382923/149‑1 CGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGG < 1:1926018/149‑1 CTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTCACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGCGTT > 2:150563/1‑149 TGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATATTTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTT > 1:368320/1‑149 TGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTT < 1:377684/149‑1 GGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTT < 1:454895/149‑1 GCGATGCGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTT < 1:1278357/149‑1 CGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAATAATCCTGTAATAATTACTTACATCCGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTTT < 1:1324833/149‑1 GATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTCCGCCTGCAAATCGGCGTGGGAA > 1:1855399/1‑149 TCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGGGGTAAGAAGAGCGGACAAACG > 1:532744/1‑149 accTCTGCCTGATAAAAACCCCGCTATTTGCAGCGCGTTTCTTAACAGACAAATGTAAGTAATTATAACAGGATTACTTAACTTCCAACCCTTTCGCCTGCAAAACAGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGG < 1:976949/146‑1 ATAAAAAACCCGCTTTTTGAAGCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAAGGGACCGCATGCAGCATGGGTAAAGCCCAT > 1:586263/1‑149 AAAAAACCCGCTTTTTGAAGCGGGGTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCACGACGCGTGGGTAAAGCCCACCG > 2:1829149/1‑149 AAAAACCCGCTTTTTGAAGCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGC > 1:22390/1‑149 AAACCCGCTTTTTGAAGCGGGTTTTTTATCAGACAGAAGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAAGCGGCGTGGTAAGAAGAGCGGACAAAGGGACCGCATGCAGCATGGGTGAAGCCCATCGGCA > 1:1323287/1‑149 CCCGCTTTTTGAAGCGGGGTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCGTTTCGCCTGCACATCGGCGTGGTAAGAAGAGCGGACAACCGGACCGCATGCAGCATGAGTAAAGGCCAGCGCCAGCG > 2:879263/1‑149 GCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCTCATCGCCAGCGCTTCGGCTTTCAT < 1:1035595/149‑1 GCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGCCAGCGCTTCGGCTTTCAT > 1:616960/1‑149 GCGGGTTTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGAGTAAGGCCCATCGCCAGCGCTTCGGCTTTCAT > 2:1148451/1‑149 TTTTTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGCCAGCGCTTCGGCTTTCATTTCGTC < 1:953952/149‑1 TTATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCTTCGCCAGCGCTTCGGCTTTCATTTCGTCGAA < 1:498609/149‑1 TATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGCCAGCGCTTCGGCTTTCATTTCGTCGAAC > 1:2042231/1‑149 CCGAAGCGCTGGCGATGGGCTTTACCCATGCTGCATGCGGTCCGTTTGTCCGCTCTTCTTACCACGCCGATTTGCAGGCGAAAGGGATGGAAGTTAAGTAATCCTGTAATAATTACTTACATCTGTCTGATAAAAAACCCGCTTTTTGAAGCGGGTTTTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/659351‑659191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aagcgggttttttATCAGACAGATGTAAGTAATTATTACAGGATTACTTAACTTCCATCCCTTTCGCCTGCAAATCGGCGTGGTAAGAAGAGCGGACAAACGGACCGCATGCAGCATGGGTAAAGCCCATCGCCAGCGCTTCGGCTTTCATTTCGTCGAAC > NC_000913/659221‑659368 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |