New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4542683 =97 (0.790)20 (0.170) 20/278 9.4 17.3% intergenic (+49/‑433) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
?NC_000913 4542997 = 100 (0.860)intergenic (+363/‑119) fimE/fimA tyrosine recombinase/inversion of on/off regulator of fimA/major type 1 subunit fimbrin (pilin)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 101 total aligned reads displayed.

CTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542540‑4542831
                                                                                                                                               |                                                                                                                                                     
cTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTgggg                                                                                                                                                  >  2:160689/1‑149 (MQ=255)
     cGTTATACCGCCAGTAATGCTGCTCGTTTTGACGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                             <  2:1641383/149‑1 (MQ=255)
     cGTAATACCGCAAGTAATGCTACGCGTTTAGCCACATTATGTGAAAGAAATAATCTCATAAACGAAAAAATAAAAACAGAACAACTTTTATCCAACTTATTGACAAAAAAATAAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                             <  2:1899185/149‑1 (MQ=255)
     agTTATACCGATTGTAATGTTGCTCGTGGGGCCGGATTATGGGGAGGGGATAATCGCTTAAACGAAAGATTTGAACGAGAAGATGTTTGATTTATTTTTTTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCaaa                                                                                                                                             <  2:68936/148‑1 (MQ=255)
      gTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCattt                                                                                                                                            <  1:182725/149‑4 (MQ=255)
       ttATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTAGGGCCAAACt                                                                                                                                           >  2:457401/1‑149 (MQ=255)
         ataCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGt                                                                                                                                         <  2:1420600/149‑1 (MQ=255)
          taCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGTAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAAGAAATACAAGACAATTGGGGCCAAACTGTc                                                                                                                                        >  2:1505102/1‑149 (MQ=255)
          taCCGCCAGTAATGCCGCTCGGTTTGCCGCATTATGGTAAATAAATAATCTCATAAAGGAAAAATTAAAAAGGGAAGAGGTATGATTTAACTTATTGAGAATAAATTTAAAAAAACTAATAAATACAAGACAATTGGGGCCAAACTGTc                                                                                                                                        <  2:592450/149‑1 (MQ=255)
           gccGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAGAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTcc                                                                                                                                       <  2:476110/148‑1 (MQ=255)
           aCCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACACATAAATACAAGACAATTGGGGCCAAACTGTcc                                                                                                                                       <  2:2019534/149‑1 (MQ=255)
             cGCCAGGAATGCTTGTCGGTTGGCCGAATTATGAGAAAAAAATGATCTAAATAACGTTAGATGAATAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGTCATTTGGGGCCAAACTGTCCat                                                                                                                                     <  2:1391131/149‑1 (MQ=255)
              gCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCgta                                                                                                                                    >  2:1564532/1‑149 (MQ=255)
                  gTAATGCTGCTCGTTTTGCCGTATTATGGGAAAGAAATAATCTAATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                <  2:285139/149‑1 (MQ=255)
                  gTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                >  2:694695/1‑149 (MQ=255)
                  gTAATGCAGATCGTATTGCCGAATTAAGGGAAAGAAATAATCTCATAAAAAAAAAAAAAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCat                                                                                                                                <  2:238133/149‑1 (MQ=255)
                      tgctgcTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaat                                                                                                                            >  2:625368/1‑149 (MQ=255)
                        ctgctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCataaataa                                                                                                                          >  2:1877040/1‑149 (MQ=255)
                          gctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGt                                                                                                                        <  2:1809472/149‑1 (MQ=255)
                           ctCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGt‑t                                                                                                                      <  1:321827/149‑1 (MQ=255)
                            tCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑Ta                                                                                                                     <  2:266127/149‑1 (MQ=255)
                                       gATTATGAGAAAGAAATAATCTCATACACGAAATATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAGATAAGT‑TACGTATTTTTtc                                                                                                          <  1:1484933/149‑1 (MQ=255)
                                          tATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCa                                                                                                       >  2:1535274/1‑149 (MQ=255)
                                           atcggAAATAAATAATCTCATAAACGAAACATTAAAAATAGTAGAGGTTTGATTTAACTGATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACTATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCaa                                                                                                      <  2:113795/146‑1 (MQ=255)
                                           aTGTGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGTCAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCaa                                                                                                      <  2:501818/149‑1 (MQ=255)
                                            tGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAg                                                                                                     >  2:1188620/1‑149 (MQ=255)
                                            tGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTAGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAg                                                                                                     >  1:471267/1‑149 (MQ=255)
                                            tGGGAAAGAAATAATCTCATAAACGAAAAAGTAAAACGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAg                                                                                                     >  2:1548401/1‑149 (MQ=255)
                                               gaaagaaaTAATCTCATAAACGAAAAATTAAAATGAGAAAAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAAAACAAGACGATTGAGGCCAAACTGTCCATATCATAAAAAAGA‑TACGTATTTTTTCTCAAGCAt                                                                                                  >  2:987556/1‑149 (MQ=255)
                                               gaaagaaaTAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCAt                                                                                                  >  2:175589/1‑149 (MQ=255)
                                                aaagaaaTAATCTCATAAACGAAAAATTCAAAAGAGAAGAGGGTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATa                                                                                                 >  2:1200732/1‑149 (MQ=255)
                                                     aataatCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAat                                                                                            >  1:829206/1‑149 (MQ=255)
                                                            tcATAAACGAAAAAGTACAAAGAGAAGATGTGGGATTTAACTTATGGATAATAAAGTTAAAAAAACAAATAAATACTAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaa                                                                                     <  2:358316/149‑1 (MQ=255)
                                                             cATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaa                                                                                    >  1:1666882/1‑149 (MQ=255)
                                                              atgaaCAAAAAATTAAAAAGAGAAGGGGTTTGAGTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                   <  2:194887/146‑1 (MQ=255)
                                                              aTAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                   >  1:1445804/1‑149 (MQ=255)
                                                              aTAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTaaaaaa                                                                                   >  1:1447874/1‑149 (MQ=255)
                                                               tAAGCGAAGAATTAAAAAAAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACTAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc                                                                                  <  2:290006/149‑1 (MQ=255)
                                                               tAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAc                                                                                  <  1:74728/149‑1 (MQ=255)
                                                                aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg                                                                                 >  2:1982113/1‑149 (MQ=255)
                                                                aaaCGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACg                                                                                 <  1:810427/149‑1 (MQ=255)
                                                                 agcgtaaaaTTAAACAGAGAAGAGGTTTGATTTAACTTATTAATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATACAAAAATTAAAAAACGa                                                                                >  2:869520/6‑149 (MQ=255)
                                                                    gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                             >  2:270263/1‑149 (MQ=255)
                                                                    gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                             >  1:2007286/1‑149 (MQ=255)
                                                                    gAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaa                                                                             >  2:1484872/1‑149 (MQ=255)
                                                                     aaaaaTTAAAAAGAGAAGAGGTTTGATTTAATCTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaa                                                                            <  1:221712/149‑1 (MQ=255)
                                                                     aaaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaa                                                                            >  2:504491/1‑149 (MQ=255)
                                                                      aaaaTTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACaaaa                                                                           <  1:1863521/149‑1 (MQ=255)
                                                                            aaaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATc                                                                     <  1:1198934/149‑1 (MQ=255)
                                                                             aaaaGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCt                                                                    >  2:921521/1‑149 (MQ=255)
                                                                                     agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt                                                            <  1:1548401/149‑1 (MQ=255)
                                                                                     agagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGttt                                                            <  1:1188620/149‑1 (MQ=255)
                                                                                      gagGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTg                                                           >  1:586814/1‑149 (MQ=255)
                                                                                       agGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGa                                                          >  1:168072/1‑149 (MQ=255)
                                                                                       agGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCACCTAACTGTTTGa                                                          <  1:1474440/149‑1 (MQ=255)
                                                                                        ggTTTCATTTAAGTTAATAAAAATAAAGATAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCCT‑CCAAATTTAACTGTAGAAATCTTTTCTACTACATAAAAATATAAAAAAAAGAAAAAAAGCATCTAACTGTTTGat                                                         <  2:942181/149‑1 (MQ=255)
                                                                                         gTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGata                                                        >  2:159273/1‑149 (MQ=255)
                                                                                          tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTTTTTTTTTTACAAATATTAAAAAACGACAAAAATCATCTCACTGTTTGatat                                                       >  2:1119819/1‑149 (MQ=255)
                                                                                          tttGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGatat                                                       <  2:1933063/149‑1 (MQ=255)
                                                                                             gATTTAACTTATTGATAATAAAGTTAAAAAATCAAATAAATACCAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGCATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTa                                                    <  1:1372537/149‑1 (MQ=255)
                                                                                              aTTTAACATATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTaa                                                   <  1:1781520/149‑1 (MQ=255)
                                                                                                 tAACTTATTGATAATAAAGTAAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAatt                                                <  1:1592701/149‑1 (MQ=255)
                                                                                                     ttATTGATAATAAAGTTAAAAATACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACTTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                            <  1:76037/149‑1 (MQ=255)
                                                                                                     ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                            >  1:187102/1‑149 (MQ=255)
                                                                                                     ttATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAATAATCAAGCAGCTAACTGTTTGATATGTAAATTAttt                                            <  1:1002000/149‑1 (MQ=255)
                                                                                                     ttATTGAAAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                            <  1:987556/149‑1 (MQ=255)
                                                                                                     ataataataataAAGTTAAAAAAACAAATAAATACAAGAAAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTAttt                                            <  2:152448/143‑1 (MQ=255)
                                                                                                         tGAAAATAAAGTTAAAAAAACAAATAAATACAAGACAAGTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTAt                                        <  2:550244/149‑1 (MQ=255)
                                                                                                           ataataAAGTTAAAAAAACAAATGAGTACAAGACAATTGGGACCAAACTAGCCATATAATAAATAAGT‑TAAGTATTTTTTCTCAAGCATAAAAATATTCAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTg                                      >  2:699965/1‑149 (MQ=255)
                                                                                                             aataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTa                                    <  1:160689/149‑1 (MQ=255)
                                                                                                              ataaAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTaa                                   <  1:1237096/149‑1 (MQ=255)
                                                                                                               taaAGTTAAAAAAACAAATAAATTCAAGACAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAACACGACAAAAAGCATCTTACCGTTTGATATGGAAATTATTTTTATTGTaaa                                  <  2:402389/149‑1 (MQ=255)
                                                                                                               taaAGTTAAAAAAACAAATAAATACAAGCGAATCGGGGCCAAACTGTCCATATCATAAATACGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAATCGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTaaa                                  <  2:1299743/149‑1 (MQ=255)
                                                                                                                aaaaatAAAAAAACAAATAAATACAATACAATGGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaat                                 <  2:1429684/144‑1 (MQ=255)
                                                                                                                 aaGTTAAAAAAACAAATAAATACAATACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatt                                <  1:931327/149‑1 (MQ=255)
                                                                                                                 aaGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCTTTCTTTTAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatt                                >  2:1824479/1‑149 (MQ=255)
                                                                                                                  aGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAaatta                               <  1:1465485/149‑1 (MQ=255)
                                                                                                                    ttAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCAATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATTAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATGGTaaaattat                             >  1:1861010/1‑144 (MQ=255)
                                                                                                                      aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATCTCATAAATAAGT‑AACGTATTTTTTTTCAAGCATAAAAATATTAAAAAAAAAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                           <  2:1254801/149‑1 (MQ=255)
                                                                                                                      aaaaaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAAttt                           <  1:1535274/149‑1 (MQ=255)
                                                                                                                         aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcac                        <  1:175589/149‑1 (MQ=255)
                                                                                                                         aaaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCAAAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcac                        <  1:159273/149‑1 (MQ=255)
                                                                                                                          aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCCTATCATCAATCACT‑TACGTATTTTTTCCCAAGCATAAAAATATTAAAAAACGCCAAAAAGCATCTAACTGCTTGATATGTAAATTATTTCTATTGTAAATTAATTTcaca                       <  1:457401/149‑1 (MQ=255)
                                                                                                                          aaaCAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAACTTAATTTcgcc                       >  1:838521/1‑146 (MQ=255)
                                                                                                                          aaaCAAATAAATACAAGAAAATTGGGGCCAAACTGTCCATAGCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTcaca                       <  2:1064507/149‑1 (MQ=255)
                                                                                                                                   aataCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTTTTTCTTAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCg              >  2:343560/1‑149 (MQ=255)
                                                                                                                                     taCAAGACAGTTGGGGCCAAACCGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAAAGAAAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCt            <  2:1070455/149‑1 (MQ=255)
                                                                                                                                      atgaaaCATTTGGGGCCAAACTGTTCATATCATATATCAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACAGCACCTCCGCta           <  2:1060739/144‑1 (MQ=255)
                                                                                                                                      aCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTCTTGTAAATTAATTTCACATCACCTCCGCta           >  2:345532/1‑149 (MQ=255)
                                                                                                                                      aCAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCta           <  1:1574006/149‑1 (MQ=255)
                                                                                                                                        aaGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCtata         >  1:955953/1‑149 (MQ=255)
                                                                                                                                         aaacatttGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat        >  1:290728/7‑149 (MQ=255)
                                                                                                                                         aGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat        <  1:150709/149‑1 (MQ=255)
                                                                                                                                         aGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTatat        <  1:694695/149‑1 (MQ=255)
                                                                                                                                          gACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCCCCGCTATATg       >  2:763665/1‑149 (MQ=255)
                                                                                                                                           aCATTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGt      >  1:1861812/1‑149 (MQ=255)
                                                                                                                                             aaTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAATCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaa    >  2:1638526/1‑149 (MQ=255)
                                                                                                                                             aaTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTaa    >  2:1638107/1‑149 (MQ=255)
                                                                                                                                              aTTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTGTATGTaaa   >  1:507365/1‑149 (MQ=255)
                                                                                                                                               ttGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAg  <  1:1982113/149‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                     
CTGTGCGTTATACCGCCAGTAATGCTGCTCGTTTTGCCGGATTATGGGAAAGAAATAATCTCATAAACGAAAAATTAAAAAGAGAAGAGGTTTGATTTAACTTATTGATAATAAAGTTAAAAAAACAAATAAATACAAGACAATTGGGGCCAAACTGTCCATATCATAAATAAGT‑TACGTATTTTTTCTCAAGCATAAAAATATTAAAAAACGACAAAAAGCATCTAACTGTTTGATATGTAAATTATTTCTATTGTAAATTAATTTCACATCACCTCCGCTATATGTAAAG  >  NC_000913/4542540‑4542831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.