mutation predictions | marginal predictions | summary statistics | genome diff | command line log
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breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal new junction evidence (sorted from low to high skew) | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4304576 = | 72 (0.870) | 3 (0.040) | 3/254 | NT | 4.4% | intergenic (‑172/+37) | ytcA/yjcS | putative inner membrane efflux pump‑associated DUF1656 family protein/metallo‑beta‑lactamase superfamily protein |
| ? | NC_000913 | 4304604 = | 65 (0.860) | intergenic (‑200/+9) | ytcA/yjcS | putative inner membrane efflux pump‑associated DUF1656 family protein/metallo‑beta‑lactamase superfamily protein | |||||
| * | ? | NC_000913 | 4051971 = | 123 (1.490) | 4 (0.050) | 4/264 | NT | 3.3% | intergenic (+116/‑73) | yihI/hemN | activator of Der GTPase/coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent |
| ? | NC_000913 | 4052005 = | 116 (1.470) | intergenic (+150/‑39) | yihI/hemN | activator of Der GTPase/coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen‑independent | |||||
| * | ? | NC_000913 | 3917666 = | 108 (1.310) | 3 (0.040) | 3/270 | NT | 2.7% | coding (599/864 nt) | atpG | F1 sector of membrane‑bound ATP synthase, gamma subunit |
| ? | NC_000913 | 3917721 = | 112 (1.390) | coding (544/864 nt) | atpG | F1 sector of membrane‑bound ATP synthase, gamma subunit | |||||
| * | ? | NC_000913 | 3587429 = | 122 (1.480) | 4 (0.050) | 4/256 | NT | 3.6% | coding (684/744 nt) | ugpQ | glycerophosphodiester phosphodiesterase, cytosolic |
| ? | NC_000913 | 3587463 = | 102 (1.330) | coding (650/744 nt) | ugpQ | glycerophosphodiester phosphodiesterase, cytosolic | |||||
| * | ? | NC_000913 | 3056787 = | 98 (1.190) | 3 (0.040) | 3/260 | NT | 3.2% | coding (549/549 nt) | fau | 5‑formyltetrahydrofolate cyclo‑ligase family protein |
| ? | NC_000913 | 3056811 = | 92 (1.190) | intergenic (+24/‑36) | fau/sibC | 5‑formyltetrahydrofolate cyclo‑ligase family protein/sRNA antisense regulator of toxic IbsC protein | |||||
| * | ? | NC_000913 | = 248332 | NA (NA) | 3 (0.040) | 3/266 | NT | 2.8% | noncoding (186/188 nt) | REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences | REP19 (repetitive extragenic palindromic) element; contains 4 REP sequences |
| ? | NC_000913 | 4633164 = | 103 (1.300) | noncoding (73/140 nt) | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||