New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 122444 = | 39 (0.640) | 6 (0.120) +GGTAGAGTAC |
3/78 | NT | 9.3% | coding (622/1551 nt) | cueO | multicopper oxidase (laccase) |
? | Exported | = 2498641 | 109 (1.780) | coding (1181/1689 nt) | ilvB | acetolactate synthase I, large subunit |
ATCGCCAAACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/122458‑122444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCTGACCAACGT < Exported/2498641‑2498629 |||||||||| ATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGT < 1:136032/38‑1 ATCGCCAAACCAGCCGGTAGAGTACTGCTGACCAA > 1:489398/1‑35 TCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGT < 1:1344438/37‑1 TCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGT < 1:160866/37‑1 TCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGT < 1:4045669/37‑1 TCGCCAAACCAGCCGGTAGAGTACTGCTGACCAACGT > 1:5553900/1‑37 |||||||||| ATCGCCAAACCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/122458‑122444 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGCTGACCAACGT < Exported/2498641‑2498629 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |