New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 299745 | 99 (1.610) | 8 (0.150) +CGCTA |
3/88 | NT | 10.6% | coding (641/1782 nt) | mdlB | fused predicted multidrug transporter subunits and ATP binding components of ABC superfamily |
? | Exported | = 1746081 | 52 (0.850) | coding (500/1335 nt) | srmB | ATP‑dependent RNA helicase |
AATCATCAATGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/299731‑299745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCCATATCCAGCATACGGTCTGCTTCGT < Exported/1746081‑1746051 ||||| cATCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGTCGGC > 1:5502308/2‑46 ATCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGTCGGCCTCat < 1:3035133/50‑3 ATCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGT < 1:1296963/41‑1 ATCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGT < 1:1430596/41‑1 TCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGT < 1:4334062/40‑1 TCATCAATGGCATCGCTAAATCCCATATCCAGCATGCGG < 1:2077166/39‑1 CATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGTCGGC > 1:604080/1‑43 CATCAATGGCATCGCTAAATCCCATATCCAGCATGCGGTCGGC > 1:953336/1‑43 ||||| AATCATCAATGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/299731‑299745 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGCCCATATCCAGCATACGGTCTGCTTCGT < Exported/1746081‑1746051 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |