New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 369453 = | 61 (0.990) | 6 (0.130) +TGTGCGGCCGTC |
3/74 | NT | 12.8% | coding (400/3882 nt) | entF | enterobactin synthase multienzyme complex component, ATP‑dependent |
? | Exported | = 425443 | 48 (0.780) | coding (610/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase |
TGGTGATAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/369466‑369453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGCCGGTTTCC < Exported/425443‑425431 |||||||||||| TGGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCC < 1:3376153/39‑1 GGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCC > 1:1516602/1‑38 GGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTTTCC > 1:5142248/1‑38 GGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTT < 1:3978948/35‑1 GGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTT < 1:4272849/35‑1 GGTGATAACGCTGTGTGCGGCCGTCAAAGCCGGTT < 1:5392012/35‑1 |||||||||||| TGGTGATAACGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/369466‑369453 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAGCCGGTTTCC < Exported/425443‑425431 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |