| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 412590 = | 16 (0.260) | 9 (0.180) | 3/82 | NT | 24.9% | intergenic (‑235/+54) | leuS/lnt | leucyl‑tRNA synthetase/apolipoprotein N‑acyltransferase |
| ? | Exported | 2911774 = | 41 (0.800) | intergenic (+69/+137) | mgtA/yjgF | magnesium transporter/ketoacid‑binding protein | |||||
AGTCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/412667‑412590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggatgcGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTAGC > Exported/2911774‑2911843 AGTCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCAC < 1:2598952/71‑1 GTCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACC < 1:1758138/71‑1 TCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCG < 1:4833794/71‑1 TCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCG < 1:4636323/71‑1 TCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCG > 1:4316053/1‑71 TGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGA > 1:775512/1‑71 TGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGA > 1:2301106/1‑71 CGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGAT < 1:3384290/70‑1 CGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGG < 1:1055871/68‑1 TCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCG < 1:1914202/65‑1 TCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCG < 1:4701959/65‑1 AGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCG < 1:2131610/69‑1 CCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCa > 1:1442381/1‑55 TCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCAC > 1:73213/1‑42 CTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGat > 1:1035075/1‑68 CTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGat > 1:5580942/1‑68 CTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGat > 1:2375641/1‑68 TCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGATAACAA < 1:1471091/71‑1 TCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGATAACAA < 1:548195/71‑1 TCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGATAACAA < 1:591027/71‑1 GTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGATAACAAta < 1:1359697/71‑3 GTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGGATAACAAta > 1:179359/1‑69 GTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGCGGCATCAGTGCATTATCCGG < 1:2777510/62‑1 GGATGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGC < 1:3166951/47‑1 GGATGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGC < 1:2635218/47‑1 TGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTA < 1:1182871/71‑1 TGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTA < 1:4959696/71‑1 TGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTA < 1:1901803/71‑1 TGCGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCG > 1:5076195/1‑69 CGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTAGC < 1:5184338/71‑1 AGTCTGCGTCAGCGACGTAAATAATCCCTTCTTATCGTGCCGGAATACATCCCATATTTCGGCACGCTCACCGGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/412667‑412590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccggatgcGGCGTAAATGCCTTATCCGGCCAACAAATTCAATAAATTGCAGGAATCACGTAGGCCTGATAAGCGTAGC > Exported/2911774‑2911843 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |