New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 449684 = | 62 (1.010) | 10 (0.220) +GGCACGCTGTTC |
4/74 | NT | 17.0% | coding (654/2049 nt) | kdpB | potassium translocating ATPase, subunit B |
? | Exported | = 1336512 | 68 (1.110) | coding (409/1122 nt) | gmd | GDP‑D‑mannose dehydratase, NAD(P)‑binding |
CAAAACGCCGAACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/449699‑449684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGGTCTGGTGCAGGAA < Exported/1336512‑1336495 |||||||||||| tAAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTG < 1:2059845/39‑1 tAAAACGCCGAACGAAGGAACGCTGTTCTATGGTCTGGTG < 1:3349998/39‑1 AAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGC > 1:1617481/1‑40 AAAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTG < 1:5515702/39‑1 AAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGA > 1:2769780/1‑43 AAACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGA > 1:2985511/1‑43 ACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGA > 1:3677687/1‑41 ACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGA > 1:5379721/1‑41 ACGCCGAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGA > 1:61456/1‑41 GAACGAAGGCACGCTGTTCTATGGTCTGGTGCAGGAt < 1:2003842/37‑2 |||||||||||| CAAAACGCCGAACGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/449699‑449684 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATGGTCTGGTGCAGGAA < Exported/1336512‑1336495 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |