| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 464858 = | 81 (1.320) | 13 (0.220) | 5/94 | NT | 15.5% | coding (715/717 nt) | sdhB | succinate dehydrogenase, FeS subunit |
| ? | Exported | = 1412084 | 64 (1.090) | coding (21/1761 nt) | yejH | predicted ATP‑dependet helicase | |||||
TGCCTGATGCGACGC‑T‑TGCGCGTCTTATCAGGCCTACGGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/464900‑464858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taTGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < Exported/1412084‑1412016 TGCCTGATGCGACGC‑TATGCGCGTCTTATCAGTCCTACGGTTTATGGGCGAAG > 1:2507995/1‑53 ATGCGACGCTT‑TGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTG < 1:3447958/49‑1 ATGCGACGCTT‑TGCGCGTCTTATCAGGCCTACGGCTTACGGGCG < 1:276795/44‑1 ATGCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTG < 1:4947273/49‑1 ATGCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGA < 1:309600/45‑1 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTG < 1:5409598/47‑1 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTG < 1:5248528/47‑1 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTG < 1:2213374/47‑1 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTAT > 1:98135/1‑37 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTAT > 1:951124/1‑37 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTAT > 1:3048109/1‑37 GCGACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTAT > 1:2218124/1‑37 GACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTA > 1:373375/1‑47 GACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTA > 1:4022236/1‑47 GACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTA > 1:5000250/1‑47 GACGC‑TATGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTA > 1:1920950/1‑47 TGCGCGTCTTATCAGGCCTACGGTTTATGGGCGAAGTGTA < 1:192668/40‑1 TATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < 1:3199470/71‑1 TATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < 1:4500439/71‑1 TATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < 1:1932466/71‑1 TATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < 1:1376485/71‑1 ATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTA > 1:90613/1‑56 ATGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAA > 1:4198719/1‑51 TGCCTGATGCGACGC‑T‑TGCGCGTCTTATCAGGCCTACGGTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/464900‑464858‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taTGGGCGAAGTGTAAAAATCATGGTCTCGCGTAGGTAGATTATTCTGCTAATAGTATGCCATGGATCTTT < Exported/1412084‑1412016 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |