New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported = 75635432 (0.520)11 (0.190)
+CGG		 5/92 NT 19.8% coding (481/702 nt) lolD outer membrane‑specific lipoprotein transporter subunit
?Exported 2228487 = 63 (1.030)coding (491/759 nt) yhdZ predicted amino‑acid transporter subunit

CAGCGTGTGGCGATTGCCCGTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/756327‑756354
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCGAAAATTATGTTGTTTGATGAGCCAACGTCGGC  >  Exported/2228487‑2228526
                            |||                                        
CAGCGTGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTTGATGAACCGACTTCCGC  <  1:402484/71‑1
 AGCGTGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTT                   <  1:309163/53‑1
    GTGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAA                              <  1:564981/39‑1
     TGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAA                                <  1:1396991/36‑1
     TGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAA                                <  1:1703846/36‑1
     TGTGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAA                                <  1:82610/36‑1
       TGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAA                               <  1:4063062/35‑1
       TGGCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAA                               <  1:5658675/35‑1
         GCGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTTGATGAACCGACtt      >  1:425317/1‑56
          CGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTT                   <  1:3063217/44‑1
          CGATTGCCCGCGCGCTGGCGGTGAAGCCGAAAATGATGCTGTTT                   <  1:739910/44‑1
                            |||                                        
CAGCGTGTGGCGATTGCCCGTGCGCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  Exported/756327‑756354
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAAGCCGAAAATTATGTTGTTTGATGAGCCAACGTCGGC  >  Exported/2228487‑2228526

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.