| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 797271 = | 65 (1.060) | 14 (0.230) +T |
8/96 | NT | 27.1% | intergenic (+75/‑103) | ymgE/ycgY | predicted inner membrane protein/hypothetical protein |
| ? | Exported | = 1321672 | 12 (0.200) | intergenic (‑126/+368) | gnd/galF | gluconate‑6‑phosphate dehydrogenase, decarboxylating/predicted subunit with GalU | |||||
ATTTTTTTCACCCGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/797287‑797271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTATTTGC < Exported/1321672‑1321603 | cagTTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTAC > 1:1067358/4‑71cagTTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAG < 1:609844/65‑1 agTTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATA > 1:1707817/3‑57 agTTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATA > 1:3481067/3‑57 gTTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTT > 1:3801380/2‑71 TTTTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTT < 1:1608691/71‑1 TTTTTCACCCGTAATATAAAGCCGTAAGCATATAAG < 1:2770878/36‑1 TTTTTCACCCGTAATATAAAGCCGTAAGCATATAA < 1:2530243/35‑1 TTTCACCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAA > 1:4985643/1‑62 TTTCACCCGTAATATAAAGCCGTAAGCATATAACCATGGATAAGCTATTTATACTTTAATAAGTACTTT > 1:3851419/1‑69 TTTCACCCGTAATATAAAGACGTAAGCATATAAGCATGGATAAGCTAT < 1:503956/48‑1 CCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACT > 1:5494412/1‑71 CCCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACT < 1:2665843/71‑1 CCGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTT < 1:4396472/71‑1 CGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTA < 1:1267565/71‑1 CGTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTA < 1:613443/71‑1 GTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTT < 1:4263509/49‑1 GTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTT < 1:5619968/49‑1 GTAATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTT < 1:1376023/49‑1 AATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTATTT > 1:1874704/1‑71 AATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTT‑TATACTTATTTG > 1:5680012/1‑71 AATATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAA > 1:139492/1‑49 AATATAAAGCCATAAGCATATAAGCATGGATAAGCTATTTATACTTTAA > 1:4771007/1‑49 ATATAAAGCCGTAAGCATATAAGCATGGATAAGCTAT > 1:4652028/1‑37 ATATAAAGCCGTAAGCATATAAGCATGGATAAGCTAT > 1:4013041/1‑37 ATATAAAGCCGTAAGCATATAAGCATGGATAAGCTAT > 1:5295626/1‑37 TATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTATTTGC < 1:4786452/71‑1 | ATTTTTTTCACCCGTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/797287‑797271‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATAAAGCCGTAAGCATATAAGCATGGATAAGCTATTTATACTTTAATAAGTACTTTGTATACTTATTTGC < Exported/1321672‑1321603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |