New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 826008 | 47 (0.770) | 13 (0.280) +ACGGCTACATCA |
4/74 | NT | 26.3% | coding (405/1254 nt) | ychP | predicted invasin |
? | Exported | 1727040 = | 50 (0.810) | coding (1190/3888 nt) | purL | phosphoribosylformyl‑glycineamide synthetase |
TTTTATGACAACTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/825994‑826008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCACTTTTTCTTCATAA > Exported/1727040‑1727057 |||||||||||| cTTTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:16722/39‑1 cTTTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:3123572/39‑1 cTTTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:912676/39‑1 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTTC < 1:1151427/39‑1 TTATGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:4707470/38‑1 TATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:1529032/1‑42 TATGACAACTTGACGGCTACATCATTCACTTTTTCTT > 1:1422022/1‑37 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:1931904/1‑41 ATGACAACTTGACGGCTACATCATTCACTTTTTCTTCACAA > 1:2838818/1‑41 TGACAACTTGACGGCTACATCATTCACTTTTTCTTCAc < 1:2463354/38‑2 TGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:122654/35‑1 TGACAACTTGACGGCTACATCATTCACTTTTTCTT < 1:4611002/35‑1 CAAATTGACGGCTACATCATTCACTTTTTCTTCAc > 1:5212061/1‑34 |||||||||||| TTTTATGACAACTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/825994‑826008 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCACTTTTTCTTCATAA > Exported/1727040‑1727057 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |