| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | 1165287 = | 99 (1.610) | 8 (0.150) | 4/84 | NT | 10.4% | coding (340/1491 nt) | ynjC | fused transporter subunits and membrane component of ABC superfamily |
| ? | Exported | 1165306 = | 53 (1.010) | coding (359/1491 nt) | ynjC | fused transporter subunits and membrane component of ABC superfamily | |||||
CTGCTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1165362‑1165287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggtcTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAA > Exported/1165306‑1165374 CTGCTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAA < 1:3883188/70‑1CTGCTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAA < 1:3091135/70‑1 CTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGG > 1:3796669/1‑71 CTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGG > 1:5328688/1‑71 CTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGG > 1:3507602/1‑71 CTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC < 1:5680406/70‑1 CTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC < 1:3141259/70‑1 CTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGG < 1:3642185/68‑1 CTAAGATCCACACCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGG < 1:5309678/68‑1 ATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATC > 1:4044161/1‑61 CCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAA > 1:5643111/1‑57 ACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC < 1:663389/61‑1 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAAT > 1:2980599/1‑52 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAAT > 1:3978805/1‑52 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAAT > 1:5296852/1‑52 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAAT > 1:1727468/1‑52 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAAT > 1:1567622/1‑52 CAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAA > 1:4353742/1‑51 TTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC < 1:2782588/42‑1 TTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATC > 1:1067000/1‑38 CAGACCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTT < 1:2474633/70‑1 ACCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCT < 1:1303798/66‑1 CCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGA < 1:921847/38‑1 CCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGA < 1:704653/38‑1 CCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGA < 1:255476/38‑1 CCGATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGA < 1:1291798/38‑1 GATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGAAA > 1:2575046/1‑38 GATGCCAAATCGGTCTGGGCCTCACCCTTGCAGTGAAA > 1:2236823/1‑38 TCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGAT < 1:4726405/52‑1 TCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGAT < 1:4956084/52‑1 TCGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGAT < 1:5194348/52‑1 CGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGACCTTAGCAGCAGTA < 1:399458/64‑1 CGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTG > 1:5164055/1‑48 CGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCT < 1:372752/45‑1 CGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCT < 1:3568056/45‑1 CGGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCT < 1:780624/45‑1 GGTCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCG > 1:1167949/1‑70 TCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAA < 1:4779542/71‑1 TCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAA < 1:2401029/71‑1 TCTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTG < 1:3930659/64‑1 CTGCTGCTAAGATCCACAGCAGAAATGCGCTTTCTTTCACTGCAAGGGTGAGGCCCAGACCGATGCCAAATCGGTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/1165362‑1165287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcggtcTGGGCCTCACCCTTGCAGTGAAAGAAAGCGCATTTCTGCTGTGGATCTTAGCAGCAGTATTGAGCGAAA > Exported/1165306‑1165374 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |