New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 1370700 | 103 (1.680) | 5 (0.090) +ACTG |
3/90 | NT | 7.6% | coding (653/696 nt) | yohK | predicted inner membrane protein |
? | Exported | 2786335 = | 29 (0.470) | coding (784/873 nt) | yjbC | 23S rRNA pseudouridine synthase | |||||
Rejected: Coverage evenness skew score above cutoff. |
TTACTTCGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1370688‑1370700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGATGGAAAAAACGGCGGAAA > Exported/2786335‑2786356 |||| TTACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAA < 1:4478137/39‑1 TTACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAA < 1:5133497/39‑1 TTACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAA > 1:912862/1‑39 ACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAA > 1:4777951/1‑37 ACTTCGCTGATACTGAAGATGGAAAAAACGGTGGAAA > 1:539980/1‑37 |||| TTACTTCGCTGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1370688‑1370700 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAGATGGAAAAAACGGCGGAAA > Exported/2786335‑2786356 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |