| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | Exported | = 1639287 | 42 (0.680) | 40 (0.650) | 15/98 | NT | 49.1% | intergenic (+57/+53) | ypfN/ypfH | hypothetical protein/predicted hydrolase |
| ? | Exported | 1687651 = | 41 (0.670) | intergenic (‑32/+110) | sseB/pepB | rhodanase‑like enzyme, sulfur transfer from thiosulfate/aminopeptidase B | |||||
AACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1639242‑1639287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAG > Exported/1687651‑1687687 attCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT > 1:2786583/4‑71attCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT < 1:4143815/68‑1attCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT < 1:2626015/68‑1attCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT > 1:1694301/4‑71actCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT < 1:4576253/68‑1actCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTA > 1:800526/4‑64actCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTAT < 1:3539727/68‑1actCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTAT < 1:3142512/68‑1 ctCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTAT > 1:766880/3‑70 ctCGTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTATC < 1:3266569/69‑1 tCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATG > 1:3737166/2‑50 tCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAA > 1:417648/2‑47 CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:3560763/1‑67 CGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACA < 1:2398275/45‑1 GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGG > 1:3620561/1‑71 GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAG < 1:4664754/70‑1 GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAG < 1:2527874/70‑1 GTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCA < 1:2292632/69‑1 GTAGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTATCA < 1:2061615/69‑1 AGGCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTAT < 1:2228200/65‑1 GCCGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTATCAGGCCTA < 1:2665404/71‑1 CGGATAAGGCGTCCACGCCGCATCCGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTATCAGGCCTA > 1:3745869/1‑69 GGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTA > 1:1051323/1‑68 GGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCA > 1:2540654/1‑62 GGATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCA > 1:1768925/1‑62 GATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAga < 1:415688/71‑3 GATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAga < 1:3744905/71‑3 GATAAGGCGTTCACGCCGCATCCGGCAATGGTGACA < 1:2947988/36‑1 GATAAGGCGTTCACGCCGCATCCGGCAATGGTGACA < 1:860661/36‑1 ATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCT < 1:1256639/42‑1 ATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCT < 1:3769719/42‑1 ATAAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCT < 1:1726267/42‑1 AAGGCGTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGA > 1:60934/1‑42 GTTCACGCCGCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACAga < 1:651551/63‑3 GCATCCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACA > 1:2911165/1‑52 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:3830605/1‑37 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:4036882/1‑37 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:3345929/1‑37 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:3260030/1‑37 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:4226855/1‑37 CCGGCAATGGTGACAAATGCCTGATGCGCTACGCTTA > 1:2782819/1‑37 CGGCAGTGGTGGCAAATGCCTGATGCGCTACGCTTAT > 1:1302286/1‑37 CAATGGTGACAAATGCCTGATGCGCTACGCTTATCAGGCCTACA < 1:62743/44‑1 CAATGGTGACAAATGCCTGATGCGCTACGCTTATCA < 1:3056331/36‑1 AACCGTAGGCCGGATAAGGCGTTAACGCCGCATCCGGCAATGGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1639242‑1639287‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAG > Exported/1687651‑1687687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |