New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 1764070 | 37 (0.600) | 6 (0.100) +G |
4/96 | NT | 11.3% | intergenic (‑227/+216) | rrsG/clpB | 16S ribosomal RNA/protein disaggregation chaperone |
? | Exported | 2188894 = | 59 (0.960) | intergenic (‑36/+86) | nanA/nanR | N‑acetylneuraminate lyase/DNA‑binding transcriptional dual regulator |
CATTTCTTTGCTTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1764054‑1764070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATACCTTTATACCTGTTATACCA > Exported/2188894‑2188917 | tATTTCTTTGCTTTTCTGTATACCTTTATACCTGT < 1:1827089/34‑1 TTTCTTTGCTTTTCTGTATACCTTTATACCTGTTA > 1:2672640/1‑35 TTCTTTGCTTTTCTGTATACCTTTATACCTGTTATAC < 1:1341399/37‑1 TTCTTTGCTTTTCTGTATACCTTTATACCTGTTATAC < 1:5232726/37‑1 TCTTTGCTTTTCTGTATACCTTTATACCTGTTATAC > 1:3079751/1‑36 CTTTGCTTTTCTGTATACCTTTATACCTGTTATACCA > 1:1066489/1‑37 | CATTTCTTTGCTTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1764054‑1764070 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TATACCTTTATACCTGTTATACCA > Exported/2188894‑2188917 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |