New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 1942156 | 67 (1.090) | 5 (0.080) | 3/94 | NT | 6.7% | coding (261/660 nt) | yqfA | predicted oxidoreductase, inner membrane subunit |
? | Exported | = 1942182 | 76 (1.290) | coding (235/660 nt) | yqfA | predicted oxidoreductase, inner membrane subunit |
ACGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1942086‑1942156 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCTATTTACCTGTTGATTGC < Exported/1942182‑1942130 ACGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGG > 1:3412697/1‑71 GTTCCGGCAATCAACAGGTAAATAGCGCAATGGGCAAAAATGTGGCTGAAGAAATTTGACCA < 1:3700184/62‑1 TCCGGCAATCAACAGGTAAATAGCGCAATGGGCAAAAATGTGGCTGAAGAAATTTGACCATT > 1:1153871/1‑62 TCCGGCAATCAACAGGTAAATAGCGCAATGGGCAAAAATGTGGCTGAAGAAATTTGACCATT > 1:2002710/1‑62 GCAATCAACAGGTAAATAGCGCAACGGGCAAAAATGTGGCTGAAGAAATTTGACCATT > 1:4043483/1‑58 GCAATCAACAGGTAAATAGCGCAACGGGCAAAAATGTGGCTGAAGAAATTTGACCATT > 1:5637941/1‑58 GGGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCTATTTACCTGTTGATTGC > 1:3800905/1‑55 GGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCT < 1:4645323/37‑1 ACGGAGAATCCAGCCCCACCAGCAAAAACGGCGTGTAGGTTCCGGCAATCAACAGGTAAATAGCGCAATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/1942086‑1942156 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggGCAAAAATGTGGCTGAAGAAATTTGACCATTGCGCTATTTACCTGTTGATTGC < Exported/1942182‑1942130 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |