New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | 2049242 = | 62 (1.010) | 12 (0.240) +TCTTTTCCT |
4/80 | NT | 19.9% | coding (1113/2841 nt) | glnE | fused deadenylyltransferase and adenylyltransferase for glutamine synthetase |
? | Exported | = 2576489 | 57 (0.930) | coding (1610/1650 nt) | treF | cytoplasmic trehalase |
ATGCTGAACAATTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2049258‑2049242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTGGTACGCCGT < Exported/2576489‑2576476 ||||||||| cTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT > 1:1943789/2‑40 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG < 1:1578857/38‑1 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG < 1:3135694/38‑1 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG < 1:880456/38‑1 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC < 1:1122897/37‑1 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC < 1:2387576/37‑1 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC < 1:5157647/37‑1 GCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG < 1:3481960/37‑1 CTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT > 1:2040974/1‑37 CTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT > 1:5639603/1‑37 GAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT < 1:3306521/35‑1 GAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT < 1:5025752/35‑1 ||||||||| ATGCTGAACAATTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < Exported/2049258‑2049242 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTGGTACGCCGT < Exported/2576489‑2576476 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |