New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? Exported 2049242 =62 (1.010)12 (0.240)
+TCTTTTCCT
4/80 NT 19.9% coding (1113/2841 nt) glnE fused deadenylyltransferase and adenylyltransferase for glutamine synthetase
?Exported = 2576489 57 (0.930)coding (1610/1650 nt) treF cytoplasmic trehalase

ATGCTGAACAATTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/2049258‑2049242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTGGTACGCCGT  <  Exported/2576489‑2576476
                 |||||||||              
cTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT  >  1:1943789/2‑40
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG   <  1:1578857/38‑1
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG   <  1:3135694/38‑1
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG   <  1:880456/38‑1
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC    <  1:1122897/37‑1
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC    <  1:2387576/37‑1
 TGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCC    <  1:5157647/37‑1
  GCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCG   <  1:3481960/37‑1
   CTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT  >  1:2040974/1‑37
   CTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT  >  1:5639603/1‑37
     GAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT  <  1:3306521/35‑1
     GAACAATTGCGATCTTTTCCTGTGTGGTACGCCGT  <  1:5025752/35‑1
                 |||||||||              
ATGCTGAACAATTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  Exported/2049258‑2049242
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGTGGTACGCCGT  <  Exported/2576489‑2576476

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.