New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | Exported | = 2207483 | 19 (0.310) | 14 (0.250) | 3/88 | NT | 25.2% | intergenic (‑173/+257) | tldD/yhdP | predicted peptidase/conserved membrane protein, predicted transporter |
? | Exported | = 2294082 | 66 (1.200) | intergenic (+109/‑166) | gldA/yijF | glycerol dehydrogenase, NAD/conserved hypothetical protein |
CCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2207413‑2207483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctacAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTT < Exported/2294082‑2294013 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC < 1:996427/71‑1 aTGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGC < 1:4143606/45‑1 TGTCGGATGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGC < 1:4111864/45‑1 TGCGGCGTAAACGCCTTATCCGACCTACAAAATCACGCTAAATC > 1:4543715/1‑44 TGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAa < 1:1964225/42‑2 TGCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAa < 1:1970746/42‑2 GCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATC > 1:3013745/1‑43 GCGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAATC > 1:2903355/1‑43 CGGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAa < 1:2549137/40‑2 GGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAa > 1:3576888/1‑38 GGCATAAACGCCTTATCCGACCTACAAAATCACGCTAAa > 1:3192519/1‑38 TAAACGCCTTATCCGACCTACAAAATCACGCTAAATCA > 1:99864/1‑38 TAAACGCCTTATCCGACCTACAAAATCACGCTAAATCA > 1:3233117/1‑38 AACGCCTTATCCGACCTACAAAATCACGCTAAATCAg > 1:688064/1‑36 AACGCCTTATCCGACCTACAAAATCACGCTAAATCA > 1:721931/1‑36 CCTACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCA > 1:223170/1‑66 CCTACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCA > 1:1562397/1‑66 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:2619056/1‑68 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGC < 1:2471523/60‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGC < 1:900149/60‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGC < 1:4240040/60‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGC < 1:5430285/60‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAG < 1:1753831/57‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAG < 1:1730447/57‑1 TACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTA > 1:5455641/1‑41 ACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCA < 1:3144606/60‑1 ACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCA < 1:2117498/60‑1 ACAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCA < 1:5008087/60‑1 ACAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGT < 1:465315/54‑1 CAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTT > 1:5264793/1‑71 CAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCAT > 1:4445909/1‑60 CAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCAT > 1:197334/1‑60 CAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTTT < 1:5487399/71‑1 CAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTTT < 1:1393426/71‑1 CAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTT < 1:44739/70‑1 CAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGA > 1:4811485/1‑46 CAAAAGCACGCAAATTCAATATATTGCAGAGATGGCGTAGGCCTGA > 1:1119658/1‑46 CAAAAGCACGCAAAATCAATATATTGCAGAGATGGCGTAGGCCTGATAAGCGTAGCGCATCAGGCATTTTT > 1:5198063/1‑71 CCTGATAAGACGCACAGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTAAACGCCTTATCCGACCTAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > Exported/2207413‑2207483 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctacAAAAGCACGCAAATTCAATATATTGCAGAGATTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTT < Exported/2294082‑2294013 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |